Difference between revisions of "Tiso gene 19883"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSE6PSYN-RXN TREHALOSE6PSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** trehalose...")
(Created page with "Category:Gene == Gene Tiso_gene_19883 == * right end position: ** 1172 * transcription direction: ** POSITIVE * left end position: ** 61 * centisome position: ** 3.12981...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSE6PSYN-RXN TREHALOSE6PSYN-RXN] ==
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== Gene Tiso_gene_19883 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1172
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* common name:
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* transcription direction:
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** trehalose-6-phosphate_synthase
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** POSITIVE
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** -trehalose-phosphate_synthase
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* left end position:
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* ec number:
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** 61
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** [http://enzyme.expasy.org/EC/2.4.1.15 EC-2.4.1.15]
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* centisome position:
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** 3.12981   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
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** 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[TREHALOSE-6P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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* With common name(s):
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** 1 D-glucopyranose 6-phosphate[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 α,α-trehalose 6-phosphate[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14367]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6869]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14220]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14366]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18196]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-11201]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1172}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18889 18889]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=61}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00836 R00836]
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{{#set: centisome position=3.12981    }}
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* UNIPROT:
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{{#set: reaction associated=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN|RXN-11201}}
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** [http://www.uniprot.org/uniprot/P31677 P31677]
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** [http://www.uniprot.org/uniprot/Q00764 Q00764]
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** [http://www.uniprot.org/uniprot/P38427 P38427]
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** [http://www.uniprot.org/uniprot/Q07158 Q07158]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=trehalose-6-phosphate_synthase}}
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{{#set: common name=-trehalose-phosphate_synthase}}
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{{#set: ec number=EC-2.4.1.15}}
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{{#set: gene associated=Tiso_gene_14367|Tiso_gene_6869|Tiso_gene_14220|Tiso_gene_14366|Tiso_gene_18196}}
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{{#set: in pathway=TRESYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:32, 21 March 2018

Gene Tiso_gene_19883

  • right end position:
    • 1172
  • transcription direction:
    • POSITIVE
  • left end position:
    • 61
  • centisome position:
    • 3.12981
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19883&oldid=42261"