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| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971] == | + | == Gene Tiso_gene_19683 == |
| − | * taxonomic range: | + | * right end position: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090] | + | ** 2048 |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | + | * transcription direction: |
| − | * common name: | + | ** NEGATIVE |
| − | ** palmitate biosynthesis II (bacteria and plants) | + | * left end position: |
| | + | ** 164 |
| | + | * centisome position: |
| | + | ** 7.7578053 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** palmitic acid biosynthesis
| |
| − | ** de novo lipogenesis
| |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''31''' reactions found over '''31''' reactions in the full pathway
| + | * Reaction: [[CATAL-RXN]] |
| − | * [[3.1.2.21-RXN]] | + | ** Source: [[orthology-synechocystis]] |
| − | ** 0 associated gene:
| + | * Reaction: [[CYTOCHROME-C-PEROXIDASE-RXN]] |
| − | ** 1 reconstruction source(s) associated:
| + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
| + | *** Assignment: ec-number |
| − | * [[4.2.1.58-RXN]]
| + | ** Source: [[annotation-experimental_annotation]] |
| − | ** 6 associated gene(s): | + | *** Assignment: ec-number |
| − | *** [[Tiso_gene_135]]
| + | * Reaction: [[PEROXID-RXN]] |
| − | *** [[Tiso_gene_13394]]
| + | ** Source: [[orthology-esiliculosus]] |
| − | *** [[Tiso_gene_6884]]
| + | * Reaction: [[RXN-14240]] |
| − | *** [[Tiso_gene_136]]
| + | ** Source: [[orthology-esiliculosus]] |
| − | *** [[Tiso_gene_10876]]
| + | * Reaction: [[RXN-15288]] |
| − | *** [[Tiso_gene_500]]
| + | ** Source: [[orthology-esiliculosus]] |
| − | ** 3 reconstruction source(s) associated:
| + | * Reaction: [[RXN-8635]] |
| − | *** [[annotation-in-silico_annotation]]
| + | ** Source: [[orthology-esiliculosus]] |
| − | *** [[manual-primary_network]]
| + | == Pathways associated == |
| − | *** [[annotation-experimental_annotation]]
| + | * [[PWY-7214]] |
| − | * [[4.2.1.59-RXN]]
| + | * [[DETOX1-PWY-1]] |
| − | ** 7 associated gene(s):
| + | * [[PWY-7445]] |
| − | *** [[Tiso_gene_135]]
| + | * [[DETOX1-PWY]] |
| − | *** [[Tiso_gene_500]]
| + | * [[PWY-5506]] |
| − | *** [[Tiso_gene_6884]]
| + | * [[PWY-5461]] |
| − | *** [[Tiso_gene_6885]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | * [[4.2.1.61-RXN]] | + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_6884]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[RXN-16393]]
| + | |
| − | ** 9 associated gene(s): | + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_348]]
| + | |
| − | *** [[Tiso_gene_9394]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_7855]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_4191]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[annotation-experimental_annotation]] | + | |
| − | * [[RXN-9514]]
| + | |
| − | ** 10 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_16579]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_10415]]
| + | |
| − | *** [[Tiso_gene_624]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]] | + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9516]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_19302]]
| + | |
| − | *** [[Tiso_gene_5939]]
| + | |
| − | *** [[Tiso_gene_14485]]
| + | |
| − | *** [[Tiso_gene_15991]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]] | + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN-9518]]
| + | |
| − | ** 7 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]] | + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9520]]
| + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_6884]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[RXN-9523]]
| + | |
| − | ** 4 associated gene(s): | + | |
| − | *** [[Tiso_gene_19302]]
| + | |
| − | *** [[Tiso_gene_5939]]
| + | |
| − | *** [[Tiso_gene_14485]]
| + | |
| − | *** [[Tiso_gene_15991]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]] | + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN-9524]]
| + | |
| − | ** 10 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_624]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_10415]]
| + | |
| − | *** [[Tiso_gene_16579]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9527]]
| + | |
| − | ** 4 associated gene(s): | + | |
| − | *** [[Tiso_gene_15991]]
| + | |
| − | *** [[Tiso_gene_5939]]
| + | |
| − | *** [[Tiso_gene_19302]]
| + | |
| − | *** [[Tiso_gene_14485]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]] | + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN-9528]]
| + | |
| − | ** 10 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10415]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_624]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_16579]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9531]]
| + | |
| − | ** 4 associated gene(s): | + | |
| − | *** [[Tiso_gene_15991]]
| + | |
| − | *** [[Tiso_gene_19302]]
| + | |
| − | *** [[Tiso_gene_14485]]
| + | |
| − | *** [[Tiso_gene_5939]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]] | + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN-9532]]
| + | |
| − | ** 7 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9533]]
| + | |
| − | ** 6 associated gene(s): | + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_6884]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[RXN-9535]]
| + | |
| − | ** 9 associated gene(s):
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_15991]]
| + | |
| − | *** [[Tiso_gene_14485]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_19302]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_5939]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN-9536]]
| + | |
| − | ** 10 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_10415]]
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_624]]
| + | |
| − | *** [[Tiso_gene_16579]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9537]]
| + | |
| − | ** 9 associated gene(s):
| + | |
| − | *** [[Tiso_gene_6671]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_6884]]
| + | |
| − | *** [[Tiso_gene_6885]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_9421]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[RXN-9539]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_5939]]
| + | |
| − | *** [[Tiso_gene_14485]]
| + | |
| − | *** [[Tiso_gene_19302]]
| + | |
| − | *** [[Tiso_gene_15991]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | * [[RXN-9540]]
| + | |
| − | ** 7 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_9885]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_13083]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9549]]
| + | |
| − | ** 0 associated gene:
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
| + | |
| − | * [[RXN-9623]] | + | |
| − | ** 10 associated gene(s):
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_12275]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_4191]]
| + | |
| − | *** [[Tiso_gene_9394]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_7855]]
| + | |
| − | *** [[Tiso_gene_348]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[RXN-9655]]
| + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_500]]
| + | |
| − | *** [[Tiso_gene_13394]]
| + | |
| − | *** [[Tiso_gene_10876]]
| + | |
| − | *** [[Tiso_gene_136]]
| + | |
| − | *** [[Tiso_gene_6884]]
| + | |
| − | *** [[Tiso_gene_135]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[RXN-9657]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9658]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9659]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9660]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9661]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9662]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-9663]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_10778]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | == Reaction(s) not found ==
| + | |
| | == External links == | | == External links == |
| − | * ECOCYC:
| + | {{#set: right end position=2048}} |
| − | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5971 PWY-5971]
| + | {{#set: transcription direction=NEGATIVE}} |
| − | {{#set: taxonomic range=TAX-33090}} | + | {{#set: left end position=164}} |
| − | {{#set: taxonomic range=TAX-2}} | + | {{#set: centisome position=7.7578053 }} |
| − | {{#set: common name=palmitate biosynthesis II (bacteria and plants)}} | + | {{#set: reaction associated=CATAL-RXN|CYTOCHROME-C-PEROXIDASE-RXN|PEROXID-RXN|RXN-14240|RXN-15288|RXN-8635}} |
| − | {{#set: common name=palmitic acid biosynthesis|de novo lipogenesis}} | + | {{#set: pathway associated=PWY-7214|DETOX1-PWY-1|PWY-7445|DETOX1-PWY|PWY-5506|PWY-5461}} |
| − | {{#set: reaction found=31}} | + | |
| − | {{#set: total reaction=31}} | + | |
| − | {{#set: completion rate=100.0}}
| + | |
