Difference between revisions of "ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == * direction:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** aspartate-semialdehyde_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
+
** [http://enzyme.expasy.org/EC/1.2.1.11 EC-1.2.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 pyruvate[c] '''=>''' 1 NADH[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 CO2[c]
+
** 1 L-aspartate-semialdehyde[c] '''+''' 1 NADP+[c] '''+''' 1 phosphate[c] '''<=>''' 1 H+[c] '''+''' 1 L-aspartyl-4-phosphate[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6983]]
+
* Gene: [[Tiso_gene_18603]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_9330]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-synechocystis]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_2515]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2693]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7519]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19780]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17539]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
+
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
+
* [[PWY-7153]], grixazone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7153 PWY-7153]
−
** '''7''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
+
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537]
+
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6559]], spermidine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6559 PWY-6559]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]], superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-TCA-GLYOX-BYPASS GLYCOLYSIS-TCA-GLYOX-BYPASS]
+
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5482]], pyruvate fermentation to acetate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5482 PWY-5482]
+
* [[PWY-6562]], norspermidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[P101-PWY]], ectoine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P101-PWY P101-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
Line 62: Line 55:
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24284 24284]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00209 R00209]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02291 R02291]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: ec number=EC-1.2.1}}
+
** [http://www.uniprot.org/uniprot/P10539 P10539]
−
{{#set: gene associated=Tiso_gene_6983|Tiso_gene_9330|Tiso_gene_2515|Tiso_gene_2693|Tiso_gene_7519|Tiso_gene_19780|Tiso_gene_17539}}
+
** [http://www.uniprot.org/uniprot/P41394 P41394]
−
{{#set: in pathway=PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
+
** [http://www.uniprot.org/uniprot/P44801 P44801]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/O67716 O67716]
−
{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
+
** [http://www.uniprot.org/uniprot/Q59291 Q59291]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P57008 P57008]
 +
** [http://www.uniprot.org/uniprot/P0A9Q9 P0A9Q9]
 +
** [http://www.uniprot.org/uniprot/O25801 O25801]
 +
** [http://www.uniprot.org/uniprot/Q57658 Q57658]
 +
** [http://www.uniprot.org/uniprot/Q04797 Q04797]
 +
** [http://www.uniprot.org/uniprot/Q56732 Q56732]
 +
** [http://www.uniprot.org/uniprot/Q56734 Q56734]
 +
** [http://www.uniprot.org/uniprot/P13663 P13663]
 +
** [http://www.uniprot.org/uniprot/P23247 P23247]
 +
** [http://www.uniprot.org/uniprot/P41399 P41399]
 +
** [http://www.uniprot.org/uniprot/P41404 P41404]
 +
** [http://www.uniprot.org/uniprot/Q9JN40 Q9JN40]
 +
** [http://www.uniprot.org/uniprot/P26511 P26511]
 +
** [http://www.uniprot.org/uniprot/Q55512 Q55512]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=aspartate-semialdehyde_dehydrogenase}}
 +
{{#set: ec number=EC-1.2.1.11}}
 +
{{#set: gene associated=Tiso_gene_18603}}
 +
{{#set: in pathway=HOMOSERSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-2941|PWY-6559|PWY-5097|PWY-6562|P101-PWY}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • aspartate-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOSERSYN-PWY, L-homoserine biosynthesis: HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7153, grixazone biosynthesis: PWY-7153
    • 2 reactions found over 8 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III: PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II: PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6559, spermidine biosynthesis II: PWY-6559
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI: PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6562, norspermidine biosynthesis: PWY-6562
    • 2 reactions found over 6 reactions in the full pathway
  • P101-PWY, ectoine biosynthesis: P101-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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