Difference between revisions of "D-RIBULOKIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-RIBULOKIN-RXN D-RIBULOKIN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expas...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-RIBULOKIN-RXN D-RIBULOKIN-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
* ec number:
−
* common name:
+
** [http://enzyme.expasy.org/EC/2.7.1.47 EC-2.7.1.47]
−
** pyruvate fermentation to butanoate
+
 
* Synonym(s):
 
* Synonym(s):
−
** central fermentation pathway
 
−
** acetobutylicum fermentation
 
−
** pyruvate fermentation to butyrate
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
+
** 1 [[D-RIBULOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_16181]]
+
** 1 D-ribulose[c] '''+''' 1 ATP[c] '''<=>''' 1 D-ribulose 5-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
−
*** [[Tiso_gene_15327]]
+
 
−
*** [[Tiso_gene_17451]]
+
== Genes associated with this reaction  ==
−
** 4 reconstruction source(s) associated:
+
== Pathways  ==
−
*** [[orthology-athaliana]]
+
* [[RIBITOLUTIL-PWY]], ribitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=RIBITOLUTIL-PWY RIBITOLUTIL-PWY]
−
*** [[orthology-creinhardtii]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
*** [[orthology-synechocystis]]
+
* [[DARABCAT-PWY]], D-arabinose degradation II: [http://metacyc.org/META/NEW-IMAGE?object=DARABCAT-PWY DARABCAT-PWY]
−
*** [[orthology-esiliculosus]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[RXN-11662]]
+
== Reconstruction information  ==
−
** 7 associated gene(s):
+
* Category: [[annotation]]
−
*** [[Tiso_gene_5857]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_16703]]
+
*** Tool: [[pathwaytools]]
−
*** [[Tiso_gene_14027]]
+
−
*** [[Tiso_gene_14262]]
+
−
*** [[Tiso_gene_14026]]
+
−
*** [[Tiso_gene_18838]]
+
−
*** [[Tiso_gene_18839]]
+
−
** 5 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-creinhardtii]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RXN-11667]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_5857]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-athaliana]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE-KINASE-RXN BUTYRATE-KINASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATE-BUTYRYLTRANSFERASE-RXN PHOSPHATE-BUTYRYLTRANSFERASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1224}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-1239}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17601 17601]
−
{{#set: common name=pyruvate fermentation to butanoate}}
+
* LIGAND-RXN:
−
{{#set: common name=central fermentation pathway|acetobutylicum fermentation|pyruvate fermentation to butyrate}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01526 R01526]
−
{{#set: reaction found=3}}
+
* UNIPROT:
−
{{#set: total reaction=7}}
+
** [http://www.uniprot.org/uniprot/O52716 O52716]
−
{{#set: completion rate=43.0}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.7.1.47}}
 +
{{#set: in pathway=RIBITOLUTIL-PWY|DARABCAT-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:34, 21 March 2018

Reaction D-RIBULOKIN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-ribulose[c] + 1 ATP[c] <=> 1 D-ribulose 5-phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=D-RIBULOKIN-RXN&oldid=42435"