Difference between revisions of "2.4.1.135-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_19347 == * left end position: ** 173 * transcription direction: ** POSITIVE * right end position: ** 1951 * centisome position: ** 7.223382...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.135-RXN 2.4.1.135-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19347 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.135-RXN 2.4.1.135-RXN] ==
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* left end position:
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* direction:
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** 173
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 1951
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** [http://enzyme.expasy.org/EC/2.4.1.135 EC-2.4.1.135]
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* centisome position:
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** 7.223382   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.6.1.41-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4139]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-6557]], glycosaminoglycan-protein linkage region biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6557 PWY-6557]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=173}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: right end position=1951}}
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{{#set: ec number=EC-2.4.1.135}}
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{{#set: centisome position=7.223382    }}
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{{#set: gene associated=Tiso_gene_4139}}
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{{#set: reaction associated=3.6.1.41-RXN}}
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{{#set: in pathway=PWY-6557}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:34, 21 March 2018

Reaction 2.4.1.135-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a [protein]-3-O-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine[c] + 1 UDP-α-D-glucuronate[c] => 1 UDP[c] + 1 H+[c] + 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6557, glycosaminoglycan-protein linkage region biosynthesis: PWY-6557
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2.4.1.135-RXN&oldid=42446"