Difference between revisions of "Tiso gene 10209"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17788 RXN-17788] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA dehydrogenase ** a...")
(Created page with "Category:Gene == Gene Tiso_gene_10209 == * right end position: ** 3872 * transcription direction: ** NEGATIVE * left end position: ** 966 * centisome position: ** 11.09324...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17788 RXN-17788] ==
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== Gene Tiso_gene_10209 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3872
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* common name:
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* transcription direction:
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** Acyl-CoA dehydrogenase
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** NEGATIVE
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** acyl-_dehydrogenase
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* left end position:
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** acyl-CoA_dehydrogenase
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** 966
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
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** 11.093247   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2-KETO-ADIPATE-DEHYDROG-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[CPD-10269]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-19162]][c]
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** Source: [[orthology-athaliana]]
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* With common name(s):
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* Reaction: [[2OXOGLUTDECARB-RXN]]
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** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 palmitoleoyl-CoA[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,9Z)-hexadecenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16631]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8271]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6475]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8272]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5449]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16113]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[AKGDHe2r]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-5652]]
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* [[PWY-5084]]
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* [[PWY66-425]]
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* [[LYSINE-DEG1-PWY]]
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* [[PWY66-398]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3872}}
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{{#set: common name=Acyl-CoA dehydrogenase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: left end position=966}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: centisome position=11.093247    }}
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{{#set: ec number=EC-1.3.8}}
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{{#set: reaction associated=2-KETO-ADIPATE-DEHYDROG-RXN|2OXOGLUTDECARB-RXN|AKGDHe2r}}
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{{#set: gene associated=Tiso_gene_16631|Tiso_gene_8271|Tiso_gene_6475|Tiso_gene_8272|Tiso_gene_5449|Tiso_gene_16113}}
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{{#set: pathway associated=PWY-5652|PWY-5084|PWY66-425|LYSINE-DEG1-PWY|PWY66-398}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:34, 21 March 2018

Gene Tiso_gene_10209

  • right end position:
    • 3872
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 966
  • centisome position:
    • 11.093247
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10209&oldid=42447"