Difference between revisions of "PWY66-399"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MTHFO_nadp MTHFO_nadp] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-methyltetrahydrofolate:...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MTHFO_nadp MTHFO_nadp] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
−
** 5-methyltetrahydrofolate:NADP+ oxidoreductase
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** gluconeogenesis III
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''12''' reactions in the full pathway
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** 1.0 [[METHYLENE-THF]][m] '''+''' 1.0 [[NADPH]][m] '''+''' 1.0 [[PROTON]][m] '''=>''' 1.0 [[NADP]][m] '''+''' 1.0 [[5-METHYL-THF]][m]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1.0 5,10-methylenetetrahydropteroyl mono-L-glutamate[m] '''+''' 1.0 NADPH[m] '''+''' 1.0 H+[m] '''=>''' 1.0 NADP+[m] '''+''' 1.0 N5-methyl-tetrahydropteroyl mono-L-glutamate[m]
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*** [[Tiso_gene_8720]]
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*** [[Tiso_gene_14718]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5619]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_13317]]
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* [[Tiso_gene_14582]]
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** 7 reconstruction source(s) associated:
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** [[pantograph]]-[[creinhardtii]]
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* [[orthology]]:
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*** [[orthology-athaliana]]
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** [[pantograph]]:
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*** [[orthology-synechocystis]]
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*** [[creinhardtii]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[F16ALDOLASE-RXN]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_12272]]
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*** [[Tiso_gene_65]]
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*** [[Tiso_gene_9119]]
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*** [[Tiso_gene_14568]]
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*** [[Tiso_gene_9179]]
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*** [[Tiso_gene_9118]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[F16BDEPHOS-RXN]]
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** 7 associated gene(s):
 +
*** [[Tiso_gene_15398]]
 +
*** [[Tiso_gene_9435]]
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*** [[Tiso_gene_16502]]
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*** [[Tiso_gene_4905]]
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*** [[Tiso_gene_8226]]
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*** [[Tiso_gene_4904]]
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*** [[Tiso_gene_3483]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 5 associated gene(s):
 +
*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_235]]
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*** [[Tiso_gene_10646]]
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*** [[Tiso_gene_3344]]
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*** [[Tiso_gene_6766]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
 +
* [[PGLUCISOM-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_19480]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_3526]]
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*** [[Tiso_gene_18264]]
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*** [[Tiso_gene_3527]]
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*** [[Tiso_gene_18263]]
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*** [[Tiso_gene_12104]]
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*** [[Tiso_gene_14642]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_15144]]
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*** [[Tiso_gene_15145]]
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*** [[Tiso_gene_2812]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15513]]
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** 8 associated gene(s):
 +
*** [[Tiso_gene_7201]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_14664]]
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*** [[Tiso_gene_9923]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_19961]]
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*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_19962]]
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*** [[Tiso_gene_10646]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.32-RXN 4.1.1.32-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-526 RXN66-526]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: common name=5-methyltetrahydrofolate:NADP+ oxidoreductase}}
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{{#set: common name=gluconeogenesis III}}
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{{#set: gene associated=Tiso_gene_14582}}
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{{#set: reaction found=10}}
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{{#set: in pathway=}}
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{{#set: total reaction=12}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=83.0}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=creinhardtii}}
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Latest revision as of 19:26, 21 March 2018

Pathway PWY66-399

  • taxonomic range:
  • common name:
    • gluconeogenesis III
  • Synonym(s):

Reaction(s) found

10 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY66-399&oldid=41607"