Difference between revisions of "RXN-7741"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BISOHMYR-GLC BISOHMYR-GLC] == * smiles: ** CCCCCCCCCCCC(O)CC(=O)NC2(C(OCC1(OC(OP([O-])([O-])=O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7741 RXN-7741] == * direction: ** LEFT-TO-RIGHT * common name: ** red_chlorophyll_catabolite_re...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BISOHMYR-GLC BISOHMYR-GLC] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7741 RXN-7741] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCC(O)CC(=O)NC2(C(OCC1(OC(OP([O-])([O-])=O)C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(O)1))OC(CO)C(C2OC(CC(O)CCCCCCCCCCC)=O)O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HLDJGHAAKRKPAV-QDORLFPLSA-L
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* common name:
 
* common name:
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** lipid A disaccharide
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** red_chlorophyll_catabolite_reductase
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* molecular weight:
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* ec number:
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** 1323.726   
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** [http://enzyme.expasy.org/EC/1.3.7.12 EC-1.3.7.12]
 
* Synonym(s):
 
* Synonym(s):
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** 2,3-bis-(3-hydroxytetradecanoyl)-β-D-glucosaminyl-(β-D-1,6)-2,3-bis-(3-hydroxytetradecanoyl)-α-D-glucosaminyl-1-phosphate
 
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** 2,3-bis(3-hydroxymyristoyl)-β-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxymyristoyl)-α-D-glucosaminyl 1-phosphate
 
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** 2'-3'-diacyl-GlcN(β-1'-6)2,3-diacyl-GlcN-1-P
 
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** 2,3,2',3'-tetrakis(3-hydroxymyristoyl)-D-glucosaminyl-1,6-α-D-glucosamine 1-phosphate
 
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** 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl 1-phosphate
 
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** [2-N,3-O-bis(3-hydroxytetradecanoyl)-β-D-glucosaminyl]-(1 -> 6)-[2-N,3-O-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl phosphate]
 
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** tetraacyldisaccharide-1-phosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[TETRAACYLDISACC4KIN-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD-7063]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[CPD-7064]][c]
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* [[LIPIDADISACCHARIDESYNTH-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 red chlorophyll catabolite[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 primary fluorescent chlorophyll catabolite[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17975]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5098]], chlorophyll a degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5098 PWY-5098]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6927]], chlorophyll a degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6927 PWY-6927]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244866 25244866]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24755 24755]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58466 58466]
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** [http://www.genome.jp/dbget-bin/www_bget?R09032 R09032]
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* BIGG : lipidAds
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=red_chlorophyll_catabolite_reductase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04932 C04932]
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{{#set: ec number=EC-1.3.7.12}}
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{{#set: smiles=CCCCCCCCCCCC(O)CC(=O)NC2(C(OCC1(OC(OP([O-])([O-])=O)C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(O)1))OC(CO)C(C2OC(CC(O)CCCCCCCCCCC)=O)O)}}
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{{#set: gene associated=Tiso_gene_17975}}
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{{#set: inchi key=InChIKey=HLDJGHAAKRKPAV-QDORLFPLSA-L}}
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{{#set: in pathway=PWY-5098|PWY-6927}}
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{{#set: common name=lipid A disaccharide}}
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{{#set: reconstruction category=annotation}}
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{{#set: molecular weight=1323.726    }}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=2,3-bis-(3-hydroxytetradecanoyl)-β-D-glucosaminyl-(β-D-1,6)-2,3-bis-(3-hydroxytetradecanoyl)-α-D-glucosaminyl-1-phosphate|2,3-bis(3-hydroxymyristoyl)-β-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxymyristoyl)-α-D-glucosaminyl 1-phosphate|2'-3'-diacyl-GlcN(β-1'-6)2,3-diacyl-GlcN-1-P|2,3,2',3'-tetrakis(3-hydroxymyristoyl)-D-glucosaminyl-1,6-α-D-glucosamine 1-phosphate|2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl 1-phosphate|[2-N,3-O-bis(3-hydroxytetradecanoyl)-β-D-glucosaminyl]-(1 -> 6)-[2-N,3-O-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl phosphate]|tetraacyldisaccharide-1-phosphate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=TETRAACYLDISACC4KIN-RXN}}
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{{#set: produced by=LIPIDADISACCHARIDESYNTH-RXN}}
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Latest revision as of 19:36, 21 March 2018

Reaction RXN-7741

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • red_chlorophyll_catabolite_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 2 H+[c] + 1 red chlorophyll catabolite[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 primary fluorescent chlorophyll catabolite[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5098, chlorophyll a degradation I: PWY-5098
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6927, chlorophyll a degradation II: PWY-6927
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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