Difference between revisions of "RXN-7664"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7664 RXN-7664] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_re...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7664 RXN-7664] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** folic_acid_synthesis_protein
+
** geranylgeranyl_diphosphate_reductase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[CPD-7005]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CPD-7004]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''+''' 1 H+[c]
+
** 1 H+[c] '''+''' 1 geranylgeranyl chlorophyll a[c] '''+''' 1 NADPH[c] '''=>''' 1 dihydrogeranylgeranyl chlorophyll a[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11659]]
+
* Gene: [[Tiso_gene_2613]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
+
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
+
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
+
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P22291 P22291]
 
−
** [http://www.uniprot.org/uniprot/P26281 P26281]
 
−
** [http://www.uniprot.org/uniprot/O84619 O84619]
 
−
** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
 
−
** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
 
−
** [http://www.uniprot.org/uniprot/O66550 O66550]
 
−
** [http://www.uniprot.org/uniprot/O25680 O25680]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
 
−
** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
 
−
** [http://www.uniprot.org/uniprot/P64143 P64143]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
 
−
** [http://www.uniprot.org/uniprot/P82602 P82602]
 
−
** [http://www.uniprot.org/uniprot/P29252 P29252]
 
−
** [http://www.uniprot.org/uniprot/P72736 P72736]
 
−
** [http://www.uniprot.org/uniprot/O04862 O04862]
 
−
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
 
−
** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=folic_acid_synthesis_protein}}
+
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
−
{{#set: ec number=EC-2.7.6.3}}
+
{{#set: gene associated=Tiso_gene_2613}}
−
{{#set: gene associated=Tiso_gene_11659}}
+
{{#set: in pathway=PWY-5064}}
−
{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:36, 21 March 2018

Reaction RXN-7664

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 geranylgeranyl chlorophyll a[c] + 1 NADPH[c] => 1 dihydrogeranylgeranyl chlorophyll a[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5064, chlorophyll a biosynthesis II: PWY-5064
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7664&oldid=42651"