Difference between revisions of "HSERMETANA-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** lipoate-protein_ligase_a
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** L-methionine biosynthesis III
** lipoate-protein_ligase
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* Synonym(s):
 
* Synonym(s):
 +
** L-methionine biosynthesis by sulfhydrylation
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
** 1 [[LIPOYL-AMP]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c]
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* [[HOMOCYSMET-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 lipoyl-adenylate[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 1 AMP[c] '''+''' 2 H+[c]
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*** [[Tiso_gene_1602]]
 
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** 2 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
* [[Tiso_gene_17216]]
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* [[HOMOCYSMETB12-RXN]]
** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_1602]]
* [[Tiso_gene_8713]]
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** 4 reconstruction source(s) associated:
** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
***AUTOMATED-NAME-MATCH
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*** [[manual-primary_network]]
* [[Tiso_gene_4493]]
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*** [[annotation-experimental_annotation]]
** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
***AUTOMATED-NAME-MATCH
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* [[PWY-5344]]
* [[Tiso_gene_4494]]
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** 0 associated gene:
** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17215]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.genome.jp/dbget-bin/www_bget?R07771 R07771]
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{{#set: taxonomic range=TAX-2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-methionine biosynthesis III}}
{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: common name=L-methionine biosynthesis by sulfhydrylation}}
{{#set: common name=lipoate-protein_ligase}}
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{{#set: reaction found=3}}
{{#set: gene associated=Tiso_gene_17216|Tiso_gene_8713|Tiso_gene_4493|Tiso_gene_4494|Tiso_gene_17215}}
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{{#set: total reaction=4}}
{{#set: in pathway=PWY0-522}}
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{{#set: completion rate=75.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:36, 21 March 2018

Pathway HSERMETANA-PWY

  • taxonomic range:
  • common name:
    • L-methionine biosynthesis III
  • Synonym(s):
    • L-methionine biosynthesis by sulfhydrylation

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links