Difference between revisions of "H2PTERIDINEPYROPHOSPHOKIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_I COPROPORPHYRINOGEN_I] == * smiles: ** CC1(=C2(CC5(=C(CCC([O-])=O)C(C)=C(CC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_I COPROPORPHYRINOGEN_I] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
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* smiles:
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* direction:
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** CC1(=C2(CC5(=C(CCC([O-])=O)C(C)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC([O-])=O)C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WIUGGJKHYQIGNH-UHFFFAOYSA-J
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* common name:
 
* common name:
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** coproporphyrinogen I
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** folic_acid_synthesis_protein
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* molecular weight:
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* ec number:
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** 656.734   
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** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-10642]]
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* With common name(s):
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** 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''+''' 1 ATP[c] '''=>''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11659]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849147 20849147]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.20171594.html 20171594]
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** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62631 62631]
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** [http://www.uniprot.org/uniprot/P22291 P22291]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P26281 P26281]
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** [http://www.genome.jp/dbget-bin/www_bget?C05768 C05768]
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** [http://www.uniprot.org/uniprot/O84619 O84619]
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* HMDB : HMDB02158
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** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
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{{#set: smiles=CC1(=C2(CC5(=C(CCC([O-])=O)C(C)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC([O-])=O)C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))}}
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** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
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{{#set: inchi key=InChIKey=WIUGGJKHYQIGNH-UHFFFAOYSA-J}}
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** [http://www.uniprot.org/uniprot/O66550 O66550]
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{{#set: common name=coproporphyrinogen I}}
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** [http://www.uniprot.org/uniprot/O25680 O25680]
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{{#set: molecular weight=656.734    }}
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** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
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{{#set: reversible reaction associated=RXN-10642}}
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** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
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** [http://www.uniprot.org/uniprot/P64143 P64143]
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** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
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** [http://www.uniprot.org/uniprot/P82602 P82602]
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** [http://www.uniprot.org/uniprot/P29252 P29252]
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** [http://www.uniprot.org/uniprot/P72736 P72736]
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** [http://www.uniprot.org/uniprot/O04862 O04862]
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** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
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** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=folic_acid_synthesis_protein}}
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{{#set: ec number=EC-2.7.6.3}}
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{{#set: gene associated=Tiso_gene_11659}}
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{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:36, 21 March 2018

Reaction H2PTERIDINEPYROPHOSPHOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • folic_acid_synthesis_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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