Difference between revisions of "RXN-8655"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3038 TAX-30...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3038 TAX-3038]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-ascorbate biosynthesis V
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** lipoate-protein_ligase_a
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** lipoate-protein_ligase
 
* Synonym(s):
 
* Synonym(s):
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** L-ascorbic acid biosynthesis V
 
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** vitamin c biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
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* [[PWY-7343]]
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** 1 [[LIPOYL-AMP]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c]
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** 0 associated gene:
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* With common name(s):
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* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
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** 1 lipoyl-adenylate[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 1 AMP[c] '''+''' 2 H+[c]
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** 1 associated gene(s):
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*** [[Tiso_gene_12322]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_8713]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-7346 PWY-7346]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-7346 PWY-7346]
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* Gene: [[Tiso_gene_4494]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11147 RXN-11147]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11150 RXN-11150]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11151 RXN-11151]
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* Gene: [[Tiso_gene_17215]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11152 RXN-11152]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11153 RXN-11153]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
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* Gene: [[Tiso_gene_17216]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4493]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3038}}
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* LIGAND-RXN:
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{{#set: common name=L-ascorbate biosynthesis V}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07771 R07771]
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{{#set: common name=L-ascorbic acid biosynthesis V|vitamin c biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: total reaction=11}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: completion rate=18.0}}
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{{#set: gene associated=Tiso_gene_8713|Tiso_gene_4494|Tiso_gene_17215|Tiso_gene_17216|Tiso_gene_4493}}
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{{#set: in pathway=PWY0-522}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:36, 21 March 2018

Reaction RXN-8655

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-522, lipoate salvage I: PWY0-522
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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