Difference between revisions of "Tiso gene 3970"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Tiso_gene_3970 == * right end position: ** 8347 * transcription direction: ** POSITIVE * left end position: ** 6773 * centisome position: ** 43.07428...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672] ==
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== Gene Tiso_gene_3970 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 8347
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* common name:
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* transcription direction:
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** cis-genanyl-CoA degradation
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** POSITIVE
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* left end position:
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** 6773
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* centisome position:
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** 43.07428   
 
* Synonym(s):
 
* Synonym(s):
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** acyclic terpene utilization pathway
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* [[ACETATE--COA-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_1612]]
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== Pathways associated ==
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*** [[Tiso_gene_3617]]
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*** [[Tiso_gene_3616]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-11917]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16181]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11919]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14257]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-11921]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16181]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.26-RXN 4.1.3.26-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GERANOYL-COA-CARBOXYLASE-RXN GERANOYL-COA-CARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11918 RXN-11918]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11920 RXN-11920]
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== External links  ==
 
== External links  ==
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* UM-BBD-PWY : cit
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{{#set: right end position=8347}}
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* LIGAND-MAP:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281]
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{{#set: left end position=6773}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: centisome position=43.07428    }}
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{{#set: common name=cis-genanyl-CoA degradation}}
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: common name=acyclic terpene utilization pathway}}
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{{#set: reaction found=4}}
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{{#set: total reaction=9}}
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{{#set: completion rate=44.0}}
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Latest revision as of 20:36, 21 March 2018

Gene Tiso_gene_3970

  • right end position:
    • 8347
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6773
  • centisome position:
    • 43.07428
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3970&oldid=42679"