Difference between revisions of "RXN-14214"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14214 RXN-14214] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * Synonym(s): == React...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14214 RXN-14214] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** tRNA processing
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** ORF
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
* [[3.1.26.5-RXN]]
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** 1 [[DATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
** 5 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_14345]]
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** 1 dATP[c] '''+''' 1 H2O[c] '''=>''' 1 dADP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
*** [[Tiso_gene_10972]]
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*** [[Tiso_gene_3898]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_10971]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[Tiso_gene_14344]]
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* Gene: [[Tiso_gene_20236]]
** 2 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_12899]]
*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
* [[RXN0-4222]]
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*** Assignment: EC-NUMBER
** 2 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
*** [[Tiso_gene_11613]]
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*** Assignment: EC-NUMBER
*** [[Tiso_gene_11612]]
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== Pathways  ==
** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
* [[RXN0-6479]]
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** Source: [[orthology-esiliculosus]]
** 2 associated gene(s):
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*** Tool: [[pantograph]]
*** [[Tiso_gene_11612]]
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* Category: [[annotation]]
*** [[Tiso_gene_11613]]
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** Source: [[annotation-in-silico_annotation]]
** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
* [[RXN0-6480]]
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*** Tool: [[pathwaytools]]
** 5 associated gene(s):
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*** [[Tiso_gene_3898]]
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*** [[Tiso_gene_14345]]
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*** [[Tiso_gene_10972]]
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*** [[Tiso_gene_14344]]
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*** [[Tiso_gene_10971]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6478 RXN0-6478]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6481 RXN0-6481]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6482 RXN0-6482]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6483 RXN0-6483]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6484 RXN0-6484]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6485 RXN0-6485]
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== External links  ==
 
== External links  ==
* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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{{#set: common name=ORF}}
{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
{{#set: common name=tRNA processing}}
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{{#set: in pathway=}}
{{#set: reaction found=4}}
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{{#set: reconstruction category=orthology|annotation}}
{{#set: total reaction=10}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
{{#set: completion rate=40.0}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:36, 21 March 2018

Reaction RXN-14214

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dATP[c] + 1 H2O[c] => 1 dADP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links