Difference between revisions of "PWY-7221"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15035 RXN-15035] == * direction: ** LEFT-TO-RIGHT * common name: ** lysophospholipase ** ORF *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15035 RXN-15035] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** lysophospholipase
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** guanosine ribonucleotides de novo biosynthesis
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CPD-8355]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c]
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* [[GDPKIN-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 H2O[c] '''+''' 1 1-18:1-2-lysophosphatidylethanolamine[c] '''=>''' 1 H+[c] '''+''' 1 oleate[c] '''+''' 1 sn-glycero-3-phosphoethanolamine[c]
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*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_195]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_9290]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_18224]]
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* [[Tiso_gene_8353]]
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*** [[Tiso_gene_17272]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_16529]]
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***AUTOMATED-NAME-MATCH
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** 7 reconstruction source(s) associated:
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* [[Tiso_gene_12478]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_2505]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
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* [[Tiso_gene_12479]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
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***EC-NUMBER
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* [[GMP-SYN-GLUT-RXN]]
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* [[Tiso_gene_19778]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_6657]]
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***AUTOMATED-NAME-MATCH
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** 6 reconstruction source(s) associated:
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* [[Tiso_gene_15692]]
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_20565]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
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* [[Tiso_gene_334]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[manual-primary_network]]
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* [[Tiso_gene_12375]]
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* [[GUANYL-KIN-RXN]]
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** IN-SILICO_ANNOTATION
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** 4 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_1011]]
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== Pathways  ==
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*** [[Tiso_gene_15049]]
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* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409]
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*** [[Tiso_gene_12554]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_4560]]
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== Reconstruction information  ==
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** 5 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-synechocystis]]
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* Category: [[annotation]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** Tool: [[pathwaytools]]
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* [[IMP-DEHYDROG-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_6377]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=lysophospholipase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7221 PWY-7221]
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-3.1.1.5}}
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{{#set: common name=guanosine ribonucleotides de novo biosynthesis}}
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{{#set: gene associated=Tiso_gene_8353|Tiso_gene_12478|Tiso_gene_2505|Tiso_gene_12479|Tiso_gene_19778|Tiso_gene_15692|Tiso_gene_20565|Tiso_gene_334|Tiso_gene_12375}}
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{{#set: reaction found=4}}
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{{#set: in pathway=PWY-7409}}
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{{#set: total reaction=4}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:36, 21 March 2018

Pathway PWY-7221

  • taxonomic range:
  • common name:
    • guanosine ribonucleotides de novo biosynthesis
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7221&oldid=42685"