Difference between revisions of "TRIACYLGLYCEROL-LIPASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** L-lysine biosynthesis III
+
** ORF
 +
** zinc_finger_fyve_domain-containing_protein
 +
** triacylglycerol_lipase
 +
** class_3_lipase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.3 EC-3.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''6''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
+
** 1 [[Triacylglycerides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-2-Diglycerides]][c] '''+''' 1 [[Fatty-Acids]][c] '''+''' 1 [[PROTON]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_18603]]
+
** 1 a triglyceride[c] '''+''' 1 H2O[c] '''=>''' 1 a 1,2-diglyceride[c] '''+''' 1 a fatty acid[c] '''+''' 1 H+[c]
−
** 7 reconstruction source(s) associated:
+
 
−
*** [[annotation-experimental_annotation]]
+
== Genes associated with this reaction  ==
−
*** [[orthology-esiliculosus]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-in-silico_annotation]]
+
* Gene: [[Tiso_gene_17613]]
−
*** [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** Assignment: EC-NUMBER
−
*** [[manual-primary_network]]
+
* Gene: [[Tiso_gene_17639]]
−
*** [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[ASPARTATEKIN-RXN]]
+
*** Assignment: EC-NUMBER
−
** 4 associated gene(s):
+
* Gene: [[Tiso_gene_19184]]
−
*** [[Tiso_gene_17057]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_13809]]
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_16097]]
+
* Gene: [[Tiso_gene_14062]]
−
*** [[Tiso_gene_4345]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 7 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
−
*** [[annotation-experimental_annotation]]
+
* Gene: [[Tiso_gene_16817]]
−
*** [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-synechocystis]]
+
* Gene: [[Tiso_gene_2108]]
−
*** [[manual-primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-creinhardtii]]
+
*** Assignment: EC-NUMBER
−
* [[DIAMINOPIMDECARB-RXN]]
+
* Gene: [[Tiso_gene_906]]
−
** 2 associated gene(s):
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_10737]]
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_12041]]
+
* Gene: [[Tiso_gene_2109]]
−
** 6 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-esiliculosus]]
+
*** Assignment: EC-NUMBER
−
*** [[annotation-in-silico_annotation]]
+
* Gene: [[Tiso_gene_17612]]
−
*** [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** Assignment: EC-NUMBER
−
*** [[manual-primary_network]]
+
* Gene: [[Tiso_gene_3215]]
−
*** [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[DIHYDRODIPICSYN-RXN]]
+
*** Assignment: EC-NUMBER
−
** 1 associated gene(s):
+
** Source: [[annotation-experimental_annotation]]
−
*** [[Tiso_gene_14829]]
+
*** Assignment: EC-NUMBER
−
** 3 reconstruction source(s) associated:
+
** Source: [[orthology-esiliculosus]]
−
*** [[manual-primary_network]]
+
* Gene: [[Tiso_gene_288]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[RXN-14014]]
+
* Gene: [[Tiso_gene_2983]]
−
** 1 associated gene(s):
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_13314]]
+
*** Assignment: EC-NUMBER
−
** 3 reconstruction source(s) associated:
+
* Gene: [[Tiso_gene_905]]
−
*** [[manual-primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_11437]]
−
* [[RXN-4821]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 0 associated gene:
+
*** Assignment: EC-NUMBER
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Tiso_gene_17143]]
−
*** [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_9140]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMELATE-DEHYDROGENASE-RXN DIAMINOPIMELATE-DEHYDROGENASE-RXN]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14063]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14109]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8902]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_14064]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7915]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17614]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5716]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[LIPAS-PWY]], triacylglycerol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LIPAS-PWY LIPAS-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* LIGAND-RXN:
−
{{#set: common name=L-lysine biosynthesis III}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01369 R01369]
−
{{#set: reaction found=6}}
+
* UNIPROT:
−
{{#set: total reaction=7}}
+
** [http://www.uniprot.org/uniprot/P10335 P10335]
−
{{#set: completion rate=86.0}}
+
** [http://www.uniprot.org/uniprot/P07867 P07867]
 +
** [http://www.uniprot.org/uniprot/P11150 P11150]
 +
** [http://www.uniprot.org/uniprot/P17892 P17892]
 +
** [http://www.uniprot.org/uniprot/P24484 P24484]
 +
** [http://www.uniprot.org/uniprot/Q9TSB3 Q9TSB3]
 +
** [http://www.uniprot.org/uniprot/P40601 P40601]
 +
** [http://www.uniprot.org/uniprot/P0C0R3 P0C0R3]
 +
** [http://www.uniprot.org/uniprot/Q05489 Q05489]
 +
** [http://www.uniprot.org/uniprot/P81139 P81139]
 +
** [http://www.uniprot.org/uniprot/P17573 P17573]
 +
** [http://www.uniprot.org/uniprot/P16233 P16233]
 +
** [http://www.uniprot.org/uniprot/Q64425 Q64425]
 +
** [http://www.uniprot.org/uniprot/Q29458 Q29458]
 +
** [http://www.uniprot.org/uniprot/Q59537 Q59537]
 +
** [http://www.uniprot.org/uniprot/Q59538 Q59538]
 +
** [http://www.uniprot.org/uniprot/Q59539 Q59539]
 +
** [http://www.uniprot.org/uniprot/P32947 P32947]
 +
** [http://www.uniprot.org/uniprot/P32948 P32948]
 +
** [http://www.uniprot.org/uniprot/P32949 P32949]
 +
** [http://www.uniprot.org/uniprot/P26504 P26504]
 +
** [http://www.uniprot.org/uniprot/P61872 P61872]
 +
** [http://www.uniprot.org/uniprot/Q59932 Q59932]
 +
** [http://www.uniprot.org/uniprot/P61871 P61871]
 +
** [http://www.uniprot.org/uniprot/O66015 O66015]
 +
** [http://www.uniprot.org/uniprot/Q02351 Q02351]
 +
** [http://www.uniprot.org/uniprot/P06857 P06857]
 +
** [http://www.uniprot.org/uniprot/P04634 P04634]
 +
** [http://www.uniprot.org/uniprot/P22394 P22394]
 +
** [http://www.uniprot.org/uniprot/P29605 P29605]
 +
** [http://www.uniprot.org/uniprot/P16386 P16386]
 +
** [http://www.uniprot.org/uniprot/P08658 P08658]
 +
** [http://www.uniprot.org/uniprot/P07098 P07098]
 +
** [http://www.uniprot.org/uniprot/Q9UP41 Q9UP41]
 +
** [http://www.uniprot.org/uniprot/P24640 P24640]
 +
** [http://www.uniprot.org/uniprot/Q8VC44 Q8VC44]
 +
** [http://www.uniprot.org/uniprot/P54316 P54316]
 +
** [http://www.uniprot.org/uniprot/P29183 P29183]
 +
** [http://www.uniprot.org/uniprot/P20261 P20261]
 +
** [http://www.uniprot.org/uniprot/Q28681 Q28681]
 +
** [http://www.uniprot.org/uniprot/P26876 P26876]
 +
** [http://www.uniprot.org/uniprot/P32946 P32946]
 +
** [http://www.uniprot.org/uniprot/P34163 P34163]
 +
** [http://www.uniprot.org/uniprot/P50903 P50903]
 +
** [http://www.uniprot.org/uniprot/P41365 P41365]
 +
** [http://www.uniprot.org/uniprot/Q02104 Q02104]
 +
** [http://www.uniprot.org/uniprot/Q12616 Q12616]
 +
** [http://www.uniprot.org/uniprot/Q12614 Q12614]
 +
** [http://www.uniprot.org/uniprot/Q59811 Q59811]
 +
** [http://www.uniprot.org/uniprot/P75268 P75268]
 +
** [http://www.uniprot.org/uniprot/Q48992 Q48992]
 +
** [http://www.uniprot.org/uniprot/P78898 P78898]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=zinc_finger_fyve_domain-containing_protein}}
 +
{{#set: common name=triacylglycerol_lipase}}
 +
{{#set: common name=class_3_lipase}}
 +
{{#set: ec number=EC-3.1.1.3}}
 +
{{#set: gene associated=Tiso_gene_17613|Tiso_gene_17639|Tiso_gene_19184|Tiso_gene_14062|Tiso_gene_16817|Tiso_gene_2108|Tiso_gene_906|Tiso_gene_2109|Tiso_gene_17612|Tiso_gene_3215|Tiso_gene_288|Tiso_gene_2983|Tiso_gene_905|Tiso_gene_11437|Tiso_gene_17143|Tiso_gene_9140|Tiso_gene_14063|Tiso_gene_14109|Tiso_gene_8902|Tiso_gene_14064|Tiso_gene_7915|Tiso_gene_17614|Tiso_gene_5716}}
 +
{{#set: in pathway=LIPAS-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:36, 21 March 2018

Reaction TRIACYLGLYCEROL-LIPASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • zinc_finger_fyve_domain-containing_protein
    • triacylglycerol_lipase
    • class_3_lipase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LIPAS-PWY, triacylglycerol degradation: LIPAS-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRIACYLGLYCEROL-LIPASE-RXN&oldid=42687"