Difference between revisions of "GLYCEROL-KIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYXYLULOSE-5P DEOXYXYLULOSE-5P] == * smiles: ** CC(=O)C(O)C(O)COP([O-])(=O)[O-] * inchi key:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYXYLULOSE-5P DEOXYXYLULOSE-5P] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] ==
−
* smiles:
+
* direction:
−
** CC(=O)C(O)C(O)COP([O-])(=O)[O-]
+
** REVERSIBLE
−
* inchi key:
+
* ec number:
−
** InChIKey=AJPADPZSRRUGHI-RFZPGFLSSA-L
+
** [http://enzyme.expasy.org/EC/2.7.1.30 EC-2.7.1.30]
−
* common name:
+
−
** 1-deoxy-D-xylulose 5-phosphate
+
−
* molecular weight:
+
−
** 212.096   
+
 
* Synonym(s):
 
* Synonym(s):
−
** DXP
 
−
** deoxyxylulose-5-phosphate
 
−
** D-1-deoxyxylulose-5-P
 
−
** 1-deoxy-D-threo-pentulose 5-phosphate
 
−
** DOXP
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[DXS-RXN]]
+
** 1 [[GLYCEROL]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLYCEROL-3P]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[DXPREDISOM-RXN]]
+
** 1 glycerol[c] '''+''' 1 ATP[c] '''<=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 sn-glycerol 3-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_12434]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_16670]]
 +
** Source: [[orthology-synechocystis]]
 +
== Pathways  ==
 +
* [[PWY-4261]], glycerol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23420274 23420274]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21644 21644]
−
* HMDB : HMDB01213
+
* LIGAND-RXN:
−
* LIGAND-CPD:
+
** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
−
** [http://www.genome.jp/dbget-bin/www_bget?C11437 C11437]
+
* UNIPROT:
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/P18157 P18157]
−
** [http://www.chemspider.com/Chemical-Structure.10462373.html 10462373]
+
** [http://www.uniprot.org/uniprot/P47284 P47284]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57792 57792]
+
** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
−
* BIGG : dxyl5p
+
** [http://www.uniprot.org/uniprot/P44400 P44400]
−
{{#set: smiles=CC(=O)C(O)C(O)COP([O-])(=O)[O-]}}
+
** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
−
{{#set: inchi key=InChIKey=AJPADPZSRRUGHI-RFZPGFLSSA-L}}
+
** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
−
{{#set: common name=1-deoxy-D-xylulose 5-phosphate}}
+
** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
−
{{#set: molecular weight=212.096    }}
+
** [http://www.uniprot.org/uniprot/P25013 P25013]
−
{{#set: common name=DXP|deoxyxylulose-5-phosphate|D-1-deoxyxylulose-5-P|1-deoxy-D-threo-pentulose 5-phosphate|DOXP}}
+
** [http://www.uniprot.org/uniprot/P19255 P19255]
−
{{#set: produced by=DXS-RXN}}
+
** [http://www.uniprot.org/uniprot/P32190 P32190]
−
{{#set: reversible reaction associated=DXPREDISOM-RXN}}
+
** [http://www.uniprot.org/uniprot/P32189 P32189]
 +
** [http://www.uniprot.org/uniprot/P95907 P95907]
 +
** [http://www.uniprot.org/uniprot/Q49011 Q49011]
 +
** [http://www.uniprot.org/uniprot/O93623 O93623]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.7.1.30}}
 +
{{#set: gene associated=Tiso_gene_12434|Tiso_gene_16670}}
 +
{{#set: in pathway=PWY-4261}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:36, 21 March 2018

Reaction GLYCEROL-KIN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 glycerol[c] + 1 ATP[c] <=> 1 H+[c] + 1 ADP[c] + 1 sn-glycerol 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4261, glycerol degradation I: PWY-4261
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLYCEROL-KIN-RXN&oldid=42691"