Difference between revisions of "G5DHm"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=G5DHm G5DHm] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-5-semialdehyde dehydrogen...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=G5DHm G5DHm] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** drap_deaminase
+
** glutamate-5-semialdehyde dehydrogenase, mitochondria
−
** pseudouridine_synthase_family_protein
+
−
** ORF
+
−
** pseudouridine_synthase
+
−
** Transmembrane_protein
+
−
** trna-pseudouridine_synthasei
+
−
** ribosomal_large_subunit_pseudouridine_synthase_d
+
−
** trna_pseudouridinesynthase
+
−
** trna_pseudouridine_synthase
+
−
** pseudouridylate_synthase
+
−
** pseudouridine_synthase_rlu_family_protein
+
−
** protein_pus7
+
−
** trna_pseudouridine_synthase_a
+
−
** pseudouridine
+
−
** rna_pseudouridylate_synthase_domain-containing_protein_1
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−
** pseudouridine_synthase_1-like_protein
+
−
** trna_pseudouridine_synthase_d
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c]
+
** 1.0 [[L-GLUTAMATE-5-P]][m] '''+''' 1.0 [[PROTON]][m] '''+''' 1.0 [[NADPH]][m] '''=>''' 1.0 [[NADP]][m] '''+''' 1.0 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][m] '''+''' 1.0 [[Pi]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c]
+
** 1.0 γ-L-glutamyl 5-phosphate[m] '''+''' 1.0 H+[m] '''+''' 1.0 NADPH[m] '''=>''' 1.0 NADP+[m] '''+''' 1.0 L-glutamate-5-semialdehyde[m] '''+''' 1.0 phosphate[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2851]]
+
* Gene: [[Tiso_gene_16634]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_7584]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17798]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3154]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_11913]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_582]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9833]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17799]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15274]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18988]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16656]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18959]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_178]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5651]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_11842]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10567]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1134]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_12093]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18184]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1548]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_12635]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17745]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18936]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4703]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2850]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2988]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_19667]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7417]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13557]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18028]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4020]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4021]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18987]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16727]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5234]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19622]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_3970]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3166]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q59069 Q59069]
 
−
** [http://www.uniprot.org/uniprot/P47428 P47428]
 
−
** [http://www.uniprot.org/uniprot/P45291 P45291]
 
−
** [http://www.uniprot.org/uniprot/Q45557 Q45557]
 
−
** [http://www.uniprot.org/uniprot/Q50291 Q50291]
 
−
** [http://www.uniprot.org/uniprot/P53167 P53167]
 
−
** [http://www.uniprot.org/uniprot/Q12211 Q12211]
 
−
** [http://www.uniprot.org/uniprot/P73295 P73295]
 
−
** [http://www.uniprot.org/uniprot/P07649 P07649]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=drap_deaminase}}
+
{{#set: common name=glutamate-5-semialdehyde dehydrogenase, mitochondria}}
−
{{#set: common name=pseudouridine_synthase_family_protein}}
+
{{#set: gene associated=Tiso_gene_16634}}
−
{{#set: common name=ORF}}
+
−
{{#set: common name=pseudouridine_synthase}}
+
−
{{#set: common name=Transmembrane_protein}}
+
−
{{#set: common name=trna-pseudouridine_synthasei}}
+
−
{{#set: common name=ribosomal_large_subunit_pseudouridine_synthase_d}}
+
−
{{#set: common name=trna_pseudouridinesynthase}}
+
−
{{#set: common name=trna_pseudouridine_synthase}}
+
−
{{#set: common name=pseudouridylate_synthase}}
+
−
{{#set: common name=pseudouridine_synthase_rlu_family_protein}}
+
−
{{#set: common name=protein_pus7}}
+
−
{{#set: common name=trna_pseudouridine_synthase_a}}
+
−
{{#set: common name=pseudouridine}}
+
−
{{#set: common name=rna_pseudouridylate_synthase_domain-containing_protein_1}}
+
−
{{#set: common name=pseudouridine_synthase_1-like_protein}}
+
−
{{#set: common name=trna_pseudouridine_synthase_d}}
+
−
{{#set: ec number=EC-5.4.99.12}}
+
−
{{#set: gene associated=Tiso_gene_2851|Tiso_gene_7584|Tiso_gene_17798|Tiso_gene_3154|Tiso_gene_11913|Tiso_gene_582|Tiso_gene_9833|Tiso_gene_17799|Tiso_gene_15274|Tiso_gene_18988|Tiso_gene_16656|Tiso_gene_18959|Tiso_gene_178|Tiso_gene_5651|Tiso_gene_11842|Tiso_gene_10567|Tiso_gene_1134|Tiso_gene_12093|Tiso_gene_18184|Tiso_gene_1548|Tiso_gene_12635|Tiso_gene_17745|Tiso_gene_18936|Tiso_gene_4703|Tiso_gene_2850|Tiso_gene_2988|Tiso_gene_19667|Tiso_gene_7417|Tiso_gene_13557|Tiso_gene_18028|Tiso_gene_4020|Tiso_gene_4021|Tiso_gene_18987|Tiso_gene_16727|Tiso_gene_5234|Tiso_gene_19622|Tiso_gene_3970|Tiso_gene_3166}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:36, 21 March 2018

Reaction G5DHm

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-5-semialdehyde dehydrogenase, mitochondria
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=G5DHm&oldid=42693"