Difference between revisions of "AIRCARBOXY-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8355 CPD-8355] == * smiles: ** CCCCCCCCC=CCCCCCCCC(OCC(O)COP([O-])(=O)OCC[N+])=O * inchi ke...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylami...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8355 CPD-8355] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] ==
−
* smiles:
+
* direction:
−
** CCCCCCCCC=CCCCCCCCC(OCC(O)COP([O-])(=O)OCC[N+])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=PYVRVRFVLRNJLY-MZMPXXGTSA-N
+
 
* common name:
 
* common name:
−
** 1-18:1-2-lysophosphatidylethanolamine
+
** phosphoribosylaminoimidazole_carboxylase
−
* molecular weight:
+
* ec number:
−
** 479.593   
+
** [http://enzyme.expasy.org/EC/4.1.1.21 EC-4.1.1.21]
 
* Synonym(s):
 
* Synonym(s):
−
** 1-18:1-lysoPE
 
−
** 1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-15035]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''=>''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 2 [[PROTON]][c]
−
* [[RXN-15067]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 CO2[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''=>''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''+''' 2 H+[c]
−
* [[RXN-15036]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_16011]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=58177709 58177709]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10792 10792]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74971 74971]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
−
* HMDB : HMDB11506
+
* UNIPROT:
−
{{#set: smiles=CCCCCCCCC=CCCCCCCCC(OCC(O)COP([O-])(=O)OCC[N+])=O}}
+
** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
−
{{#set: inchi key=InChIKey=PYVRVRFVLRNJLY-MZMPXXGTSA-N}}
+
** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
−
{{#set: common name=1-18:1-2-lysophosphatidylethanolamine}}
+
** [http://www.uniprot.org/uniprot/O66608 O66608]
−
{{#set: molecular weight=479.593    }}
+
** [http://www.uniprot.org/uniprot/O67239 O67239]
−
{{#set: common name=1-18:1-lysoPE|1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine}}
+
** [http://www.uniprot.org/uniprot/P12045 P12045]
−
{{#set: consumed by=RXN-15035}}
+
** [http://www.uniprot.org/uniprot/P09029 P09029]
−
{{#set: produced by=RXN-15067}}
+
** [http://www.uniprot.org/uniprot/P12044 P12044]
−
{{#set: reversible reaction associated=RXN-15036}}
+
** [http://www.uniprot.org/uniprot/P21264 P21264]
 +
** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
 +
** [http://www.uniprot.org/uniprot/P15567 P15567]
 +
** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
 +
** [http://www.uniprot.org/uniprot/P43849 P43849]
 +
** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
 +
** [http://www.uniprot.org/uniprot/P43850 P43850]
 +
** [http://www.uniprot.org/uniprot/Q58033 Q58033]
 +
** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
 +
** [http://www.uniprot.org/uniprot/P22234 P22234]
 +
** [http://www.uniprot.org/uniprot/P22348 P22348]
 +
** [http://www.uniprot.org/uniprot/Q01930 Q01930]
 +
** [http://www.uniprot.org/uniprot/P55195 P55195]
 +
** [http://www.uniprot.org/uniprot/P50504 P50504]
 +
** [http://www.uniprot.org/uniprot/Q55498 Q55498]
 +
** [http://www.uniprot.org/uniprot/P74724 P74724]
 +
** [http://www.uniprot.org/uniprot/O80937 O80937]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=phosphoribosylaminoimidazole_carboxylase}}
 +
{{#set: ec number=EC-4.1.1.21}}
 +
{{#set: gene associated=Tiso_gene_16011}}
 +
{{#set: in pathway=PWY-6124}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction AIRCARBOXY-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylaminoimidazole_carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=AIRCARBOXY-RXN&oldid=42765"