Difference between revisions of "RXN3O-1803"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12699 CPD-12699] == * smiles: ** CCC(C)(O)C#N * inchi key: ** InChIKey=VMEHOTODTPXCKT-YFKPB...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase ** pol...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12699 CPD-12699] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] ==
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* smiles:
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* direction:
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** CCC(C)(O)C#N
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VMEHOTODTPXCKT-YFKPBYRVSA-N
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* common name:
 
* common name:
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** (2R)-2-hydroxy-2-methylbutanenitrile
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** 3-oxoacyl-synthase
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* molecular weight:
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** polyketide_synthase
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** 99.132   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-9674]]
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Palmitoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-stearoyl-ACPs]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a palmitoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-stearoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5939]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14485]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19302]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15991]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49859714 49859714]
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: smiles=CCC(C)(O)C#N}}
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{{#set: common name=polyketide_synthase}}
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{{#set: inchi key=InChIKey=VMEHOTODTPXCKT-YFKPBYRVSA-N}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: common name=(2R)-2-hydroxy-2-methylbutanenitrile}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: molecular weight=99.132    }}
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{{#set: gene associated=Tiso_gene_135|Tiso_gene_5939|Tiso_gene_13394|Tiso_gene_14485|Tiso_gene_19302|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_15991}}
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{{#set: produced by=RXN-9674}}
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{{#set: in pathway=PWY3O-355}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN3O-1803

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN3O-1803&oldid=42769"