Difference between revisions of "Tiso gene 17878"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15065 RXN-15065] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase A2 ** abhydro...")
(Created page with "Category:Gene == Gene Tiso_gene_17878 == * right end position: ** 1771 * transcription direction: ** POSITIVE * left end position: ** 35 * centisome position: ** 1.0272968...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15065 RXN-15065] ==
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== Gene Tiso_gene_17878 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1771
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* common name:
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* transcription direction:
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** phospholipase A2
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** POSITIVE
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** abhydrolase_domain-containing_protein_4-like
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* left end position:
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** ORF
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** 35
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
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** 1.0272968   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[AASP]]
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** 1 [[WATER]][c] '''+''' 1 [[1-2-DIPALMITOYLPHOSPHATIDYLCHOLINE]][c] '''=>''' 1 [[CPD-8343]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[ADENYLYLSULFKIN-RXN]]
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** 1 H2O[c] '''+''' 1 1,2-dipalmitoyl-phosphatidylcholine[c] '''=>''' 1 1-16:0-2-lysophosphatidylcholine[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* [[Tiso_gene_15046]]
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* Reaction: [[INORGPYROPHOSPHAT-RXN]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12959]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12960]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15047]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7416]], phospholipid remodeling (phosphatidylcholine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7416 PWY-7416]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7805]]
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* [[PWY-7807]]
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* [[PWY-5340]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1771}}
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{{#set: common name=phospholipase A2}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
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{{#set: left end position=35}}
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{{#set: common name=ORF}}
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{{#set: centisome position=1.0272968    }}
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{{#set: ec number=EC-3.1.1.4}}
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{{#set: reaction associated=AASP|ADENYLYLSULFKIN-RXN|INORGPYROPHOSPHAT-RXN}}
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{{#set: gene associated=Tiso_gene_15046|Tiso_gene_12959|Tiso_gene_12960|Tiso_gene_15047}}
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{{#set: pathway associated=PWY-7805|PWY-7807|PWY-5340}}
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{{#set: in pathway=PWY-7416}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:37, 21 March 2018

Gene Tiso_gene_17878

  • right end position:
    • 1771
  • transcription direction:
    • POSITIVE
  • left end position:
    • 35
  • centisome position:
    • 1.0272968
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17878&oldid=42810"