Difference between revisions of "RXN-15065"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15065 RXN-15065] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase A2 ** abhydro...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15065 RXN-15065] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
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** phospholipase A2
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** abhydrolase_domain-containing_protein_4-like
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
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* [[RXN-14796]]
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** 1 [[1-2-DIPALMITOYLPHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-8343]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18566]]
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** 1 1,2-dipalmitoyl-phosphatidylcholine[c] '''+''' 1 H2O[c] '''=>''' 1 1-16:0-2-lysophosphatidylcholine[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14799]]
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* Gene: [[Tiso_gene_15046]]
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** 5 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10116]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_3856]]
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* Gene: [[Tiso_gene_12960]]
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*** [[Tiso_gene_15327]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_17451]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_3855]]
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* Gene: [[Tiso_gene_15047]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_12959]]
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* [[RXN-14803]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_3855]]
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== Pathways  ==
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*** [[Tiso_gene_15327]]
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* [[PWY-7416]], phospholipid remodeling (phosphatidylcholine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7416 PWY-7416]
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*** [[Tiso_gene_3856]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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*** [[Tiso_gene_17451]]
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== Reconstruction information  ==
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*** [[Tiso_gene_10116]]
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14795 RXN-14795]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14797 RXN-14797]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14798 RXN-14798]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14800 RXN-14800]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14801 RXN-14801]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14802 RXN-14802]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14804 RXN-14804]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)}}
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{{#set: common name=phospholipase A2}}
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{{#set: reaction found=3}}
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{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
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{{#set: total reaction=10}}
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{{#set: common name=ORF}}
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{{#set: completion rate=30.0}}
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{{#set: ec number=EC-3.1.1.4}}
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{{#set: gene associated=Tiso_gene_15046|Tiso_gene_12960|Tiso_gene_15047|Tiso_gene_12959}}
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{{#set: in pathway=PWY-7416}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN-15065

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phospholipase A2
    • abhydrolase_domain-containing_protein_4-like
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7416, phospholipid remodeling (phosphatidylcholine, yeast): PWY-7416
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15065&oldid=42824"