Difference between revisions of "Tiso gene 2889"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14106 RXN-14106] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.4...")
(Created page with "Category:Gene == Gene Tiso_gene_2889 == * right end position: ** 8172 * transcription direction: ** NEGATIVE * left end position: ** 5022 * centisome position: ** 27.82425...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14106 RXN-14106] ==
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== Gene Tiso_gene_2889 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 8172
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/5.4.99.3 EC-5.4.99.3]
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** NEGATIVE
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* left end position:
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** 5022
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* centisome position:
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** 27.824255   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''<=>''' 1 [[CPD-15104]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (S)-2-aceto-2-hydroxybutanoate[c] '''<=>''' 1 (R)-3-hydroxy-3-methyl-2-oxopentanoate[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_10173]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[RXN-12196]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[RXN0-5462]]
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* [[Tiso_gene_10174]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: ec-number
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== Pathways ==
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== Pathways associated ==
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== Reconstruction information  ==
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* [[PWY-7184]]
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* Category: [[orthology]]
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* [[PWY-7198]]
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** Source: [[orthology-creinhardtii]]
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* [[PWY-6545]]
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*** Tool: [[pantograph]]
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* [[PWY-7210]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=8172}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25407 25407]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=5022}}
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{{#set: ec number=EC-5.4.99.3}}
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{{#set: centisome position=27.824255    }}
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{{#set: gene associated=Tiso_gene_10173|Tiso_gene_10174}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:37, 21 March 2018

Gene Tiso_gene_2889

  • right end position:
    • 8172
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5022
  • centisome position:
    • 27.824255
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2889&oldid=42831"