Difference between revisions of "DELTA3-ISOPENTENYL-PP"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DELTA3-ISOPENTENYL-PP DELTA3-ISOPENTENYL-PP] == * smiles: ** C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Metabolite]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DELTA3-ISOPENTENYL-PP DELTA3-ISOPENTENYL-PP] ==
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* taxonomic range:
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* smiles:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O-]
 
* common name:
 
* common name:
−
** glycerol degradation to butanol
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** isopentenyl diphosphate
 +
* inchi key:
 +
** InChIKey=NUHSROFQTUXZQQ-UHFFFAOYSA-K
 +
* molecular weight:
 +
** 243.069   
 
* Synonym(s):
 
* Synonym(s):
 +
** isopentenyl-pp
 +
** isopentenyl pyrophosphate
 +
** IPP
 +
** δ(3)-isopentenyl-PP
 +
** Δ3-isopentenyl-PP
 +
** 3-methylbut-3-enyl diphosphate
 +
** 3-methylbut-3-enyl pyrophosphate
  
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== Reaction(s) found ==
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== Reaction(s) known to consume the compound ==
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'''8''' reactions found over '''10''' reactions in the full pathway
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* [[FPPSYN-RXN]]
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* [[2PGADEHYDRAT-RXN]]
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* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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** 4 associated gene(s):
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* [[GGPS]]
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*** [[Tiso_gene_14718]]
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* [[GPPS]]
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*** [[Tiso_gene_8720]]
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* [[RXN-11486]]
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*** [[Tiso_gene_5619]]
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* [[RXN-8999]]
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*** [[Tiso_gene_13317]]
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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** 7 reconstruction source(s) associated:
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== Reaction(s) known to produce the compound ==
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*** [[annotation-experimental_annotation]]
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* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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*** [[orthology-esiliculosus]]
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* [[ISPH2-RXN]]
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*** [[annotation-in-silico_annotation]]
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* [[IDS1]]
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*** [[orthology-athaliana]]
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== Reaction(s) of unknown directionality ==
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*** [[orthology-synechocystis]]
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* [[IPPISOM-RXN]]
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*** [[manual-primary_network]]
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* [[RXN0-5180]]
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*** [[orthology-creinhardtii]]
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* [[GPPSYN-RXN]]
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* [[3PGAREARR-RXN]]
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** 16 associated gene(s):
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−
*** [[Tiso_gene_2667]]
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−
*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_15048]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_16754]]
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*** [[Tiso_gene_2365]]
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−
*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_5468]]
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−
*** [[Tiso_gene_20311]]
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*** [[Tiso_gene_14664]]
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*** [[Tiso_gene_15391]]
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*** [[Tiso_gene_14212]]
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*** [[Tiso_gene_10516]]
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*** [[Tiso_gene_9923]]
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*** [[Tiso_gene_7201]]
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** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 5 associated gene(s):
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−
*** [[Tiso_gene_20000]]
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−
*** [[Tiso_gene_6766]]
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−
*** [[Tiso_gene_10646]]
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*** [[Tiso_gene_3344]]
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*** [[Tiso_gene_235]]
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** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[PEPDEPHOS-RXN]]
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** 4 associated gene(s):
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−
*** [[Tiso_gene_14504]]
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−
*** [[Tiso_gene_18206]]
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−
*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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−
* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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−
*** [[Tiso_gene_3527]]
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*** [[Tiso_gene_18263]]
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*** [[Tiso_gene_12104]]
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*** [[Tiso_gene_3526]]
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*** [[Tiso_gene_14642]]
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*** [[Tiso_gene_18264]]
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** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PWY-6131]]
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−
** 0 associated gene:
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* [[PWY-6583]]
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−
** 0 associated gene:
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_19961]]
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*** [[Tiso_gene_10646]]
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*** [[Tiso_gene_19962]]
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** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* BIGG : ipdp
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{{#set: common name=glycerol degradation to butanol}}
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* PUBCHEM:
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{{#set: reaction found=8}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15983957 15983957]
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{{#set: total reaction=10}}
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* HMDB : HMDB01347
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{{#set: completion rate=80.0}}
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* LIGAND-CPD:
 +
** [http://www.genome.jp/dbget-bin/www_bget?C00129 C00129]
 +
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.13115335.html 13115335]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=128769 128769]
 +
* METABOLIGHTS : MTBLC128769
 +
{{#set: smiles=C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O-]}}
 +
{{#set: common name=isopentenyl diphosphate}}
 +
{{#set: inchi key=InChIKey=NUHSROFQTUXZQQ-UHFFFAOYSA-K}}
 +
{{#set: molecular weight=243.069    }}
 +
{{#set: common name=isopentenyl-pp|isopentenyl pyrophosphate|IPP|δ(3)-isopentenyl-PP|Δ3-isopentenyl-PP|3-methylbut-3-enyl diphosphate|3-methylbut-3-enyl pyrophosphate}}
 +
{{#set: consumed by=FPPSYN-RXN|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN|GGPS|GPPS|RXN-11486|RXN-8999|FARNESYLTRANSTRANSFERASE-RXN}}
 +
{{#set: produced by=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN|ISPH2-RXN|IDS1}}
 +
{{#set: reversible reaction associated=IPPISOM-RXN|RXN0-5180|GPPSYN-RXN}}

Latest revision as of 19:38, 21 March 2018

Metabolite DELTA3-ISOPENTENYL-PP

  • smiles:
    • C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O-]
  • common name:
    • isopentenyl diphosphate
  • inchi key:
    • InChIKey=NUHSROFQTUXZQQ-UHFFFAOYSA-K
  • molecular weight:
    • 243.069
  • Synonym(s):
    • isopentenyl-pp
    • isopentenyl pyrophosphate
    • IPP
    • δ(3)-isopentenyl-PP
    • Δ3-isopentenyl-PP
    • 3-methylbut-3-enyl diphosphate
    • 3-methylbut-3-enyl pyrophosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O-" cannot be used as a page name in this wiki.




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