Difference between revisions of "Tiso gene 10338"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
(Created page with "Category:Gene == Gene Tiso_gene_10338 == * right end position: ** 4440 * transcription direction: ** POSITIVE * left end position: ** 29 * centisome position: ** 0.2928701...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882] ==
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== Gene Tiso_gene_10338 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** 4440
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* common name:
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* transcription direction:
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** L-ascorbate biosynthesis I (L-galactose pathway)
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** POSITIVE
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* left end position:
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** 29
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* centisome position:
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** 0.29287013   
 
* Synonym(s):
 
* Synonym(s):
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** vitamin C biosynthesis
 
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** ascorbic acid biosynthesis
 
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** L-ascorbic acid biosynthesis I
 
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** Smirnoff-Wheeler pathway
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''6''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[3.1.27.9-RXN]]
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* [[2.7.7.13-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_14704]]
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== Pathways associated ==
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** 1 reconstruction source(s) associated:
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* [[PWY-6689]]
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*** [[orthology-synechocystis]]
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* [[PWY-7803]]
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* [[GALACTONOLACTONE-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_210]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHOSMANMUT-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_5802]]
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*** [[Tiso_gene_13477]]
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*** [[Tiso_gene_4816]]
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*** [[Tiso_gene_14704]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[orthology-creinhardtii]]
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* [[RXN-1882]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6621]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1884]]
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** 5 associated gene(s):
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*** [[Tiso_gene_14920]]
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*** [[Tiso_gene_14624]]
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*** [[Tiso_gene_18748]]
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*** [[Tiso_gene_703]]
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*** [[Tiso_gene_4219]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXNQT-4142]]
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** 3 associated gene(s):
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*** [[Tiso_gene_10754]]
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*** [[Tiso_gene_15599]]
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*** [[Tiso_gene_11614]]
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** 3 reconstruction source(s) associated:
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−
*** [[orthology-athaliana]]
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−
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MANNPISOM-RXN MANNPISOM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4141 RXNQT-4141]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: right end position=4440}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-882 PWY-882]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: left end position=29}}
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{{#set: common name=L-ascorbate biosynthesis I (L-galactose pathway)}}
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{{#set: centisome position=0.29287013    }}
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{{#set: common name=vitamin C biosynthesis|ascorbic acid biosynthesis|L-ascorbic acid biosynthesis I|Smirnoff-Wheeler pathway}}
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{{#set: reaction associated=3.1.27.9-RXN}}
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{{#set: reaction found=6}}
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{{#set: pathway associated=PWY-6689|PWY-7803}}
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{{#set: total reaction=8}}
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{{#set: completion rate=75.0}}
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Latest revision as of 20:38, 21 March 2018

Gene Tiso_gene_10338

  • right end position:
    • 4440
  • transcription direction:
    • POSITIVE
  • left end position:
    • 29
  • centisome position:
    • 0.29287013
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10338&oldid=42880"