Difference between revisions of "Tiso gene 8048"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13442 RXN-13442] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_8048 == * right end position: ** 7709 * transcription direction: ** NEGATIVE * left end position: ** 4977 * centisome position: ** 47.04158...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13442 RXN-13442] ==
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== Gene Tiso_gene_8048 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7709
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** NEGATIVE
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* left end position:
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** 4977
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* centisome position:
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** 47.041588   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[CPD-14018]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14423]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 icosapentaenoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 CO2[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-7511]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7709}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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{{#set: left end position=4977}}
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{{#set: reconstruction category=annotation}}
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{{#set: centisome position=47.041588    }}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-7511}}

Latest revision as of 19:38, 21 March 2018

Gene Tiso_gene_8048

  • right end position:
    • 7709
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4977
  • centisome position:
    • 47.041588
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8048&oldid=42917"