Difference between revisions of "RXN-13008"

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(Created page with "Category:Gene == Gene Tiso_gene_17613 == * left end position: ** 988 * transcription direction: ** POSITIVE * right end position: ** 1611 * centisome position: ** 27.63636...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-ox...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17613 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] ==
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* left end position:
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* direction:
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** 988
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** 3-oxoacyl-(acyl-carrier-protein)
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** 1611
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** 27.636364   
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12086]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-OXO-EICOSAPENTAENOYL-ACP]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-HYDROXY-DOCOSAPENTAENOYL-ACP]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12579]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-docosapentaenoyl [acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxy-docosapentaenoyl-[acp][c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_9885]]
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***ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[LIPAS-PWY]]
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* Gene: [[Tiso_gene_500]]
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* [[PWY-6857]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13083]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=988}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=1611}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: centisome position=27.636364    }}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_500|Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_136}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction RXN-13008

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13008&oldid=43023"