Difference between revisions of "OXIDATIVEPENT-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-3METHYLVALERATE-RXN 2KETO-3METHYLVALERATE-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-3METHYLVALERATE-RXN 2KETO-3METHYLVALERATE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** (S)-3-methyl-2-oxopentanoate dehydrogenase (acylating)
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** pentose phosphate pathway (oxidative branch) I
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[NAD]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[2-METHYL-BUTYRYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
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* [[6PGLUCONOLACT-RXN]]
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* With common name(s):
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** 5 associated gene(s):
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** 1 NAD+[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 2-methylbutanoyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 NADH[c]
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*** [[Tiso_gene_10799]]
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*** [[Tiso_gene_20412]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5901]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15950]]
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* [[Tiso_gene_3260]]
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*** [[Tiso_gene_8585]]
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** [[pantograph]]-[[creinhardtii]]
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** 6 reconstruction source(s) associated:
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* [[Tiso_gene_18084]]
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_11793]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[manual-primary_network]]
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* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
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*** [[orthology-creinhardtii]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLU6PDEHYDROG-RXN]]
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* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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** 2 associated gene(s):
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** '''4''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_16918]]
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== Reconstruction information  ==
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*** [[Tiso_gene_14877]]
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* Category: [[orthology]]
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** 4 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN-9952]]
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** 5 associated gene(s):
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*** [[Tiso_gene_7157]]
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*** [[Tiso_gene_19590]]
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*** [[Tiso_gene_91]]
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*** [[Tiso_gene_777]]
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*** [[Tiso_gene_20238]]
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** 3 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30907 30907]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03171 R03171]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=pentose phosphate pathway (oxidative branch) I}}
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{{#set: common name=(S)-3-methyl-2-oxopentanoate dehydrogenase (acylating)}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-1.2.1}}
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{{#set: total reaction=3}}
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{{#set: gene associated=Tiso_gene_3260|Tiso_gene_18084|Tiso_gene_11793}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-5108|ILEUDEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:39, 21 March 2018

Pathway OXIDATIVEPENT-PWY

  • taxonomic range:
  • common name:
    • pentose phosphate pathway (oxidative branch) I
  • Synonym(s):

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




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