Difference between revisions of "TRANS-RXN-249"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** thiamine_monophospha...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-249 TRANS-RXN-249] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-249 TRANS-RXN-249] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
−
* common name:
+
−
** ORF
+
−
** thiamine_monophosphate_synthase
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−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13576]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[THIAMINE-P]][c]
+
** 1.0 [[ATP]][c] '''+''' 4.0 [[PROTON]][c] '''+''' 1.0 [[WATER]][c] '''<=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[Pi]][c] '''+''' 5.0 [[PROTON]][e]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 thiamine phosphate[c]
+
** 1.0 ATP[c] '''+''' 4.0 H+[c] '''+''' 1.0 H2O[c] '''<=>''' 1.0 ADP[c] '''+''' 1.0 phosphate[c] '''+''' 5.0 H+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2159]]
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* Gene: [[Tiso_gene_1366]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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−
* [[Tiso_gene_10320]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_2160]]
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−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6893]], thiamine diphosphate biosynthesis II (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6893 PWY-6893]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: direction=REVERSIBLE}}
−
{{#set: common name=ORF}}
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{{#set: gene associated=Tiso_gene_1366}}
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{{#set: common name=thiamine_monophosphate_synthase}}
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{{#set: in pathway=}}
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{{#set: ec number=EC-2.5.1.3}}
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{{#set: reconstruction category=orthology}}
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{{#set: gene associated=Tiso_gene_2159|Tiso_gene_10320|Tiso_gene_2160}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: in pathway=PWY-6907|PWY-6893}}
+
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:40, 21 March 2018

Reaction TRANS-RXN-249

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP[c] + 4.0 H+[c] + 1.0 H2O[c] <=> 1.0 ADP[c] + 1.0 phosphate[c] + 5.0 H+[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-249&oldid=43118"