Difference between revisions of "RXN-12997"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-774...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12997 RXN-12997] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12997 RXN-12997] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** L-ascorbate biosynthesis IV
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** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
 
* Synonym(s):
 
* Synonym(s):
** vitamin C biosynthesis
 
** L-ascorbic acid biosynthesis IV
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
* [[RXN-14693]]
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** 1 [[CPD-14420]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[CPD-12647]][c]
** 0 associated gene:
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* With common name(s):
** 1 reconstruction source(s) associated:
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** 1 icosatrienoyl-2-enoyl CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 (11Z,14Z,17Z)-icosa-11,14,17-trienoyl-CoA[c]
*** [[annotation-in-silico_annotation]]
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* [[RXN-8783]]
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== Genes associated with this reaction  ==
** 3 associated gene(s):
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== Pathways  ==
*** [[Tiso_gene_1948]]
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* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
*** [[Tiso_gene_1947]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
*** [[Tiso_gene_15098]]
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* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
** 1 reconstruction source(s) associated:
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** '''4''' reactions found over '''5''' reactions in the full pathway
*** [[annotation-in-silico_annotation]]
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
== Reaction(s) not found ==
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** '''5''' reactions found over '''7''' reactions in the full pathway
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCURONATE-REDUCTASE-RXN GLUCURONATE-REDUCTASE-RXN]
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== Reconstruction information  ==
* [http://metacyc.org/META/NEW-IMAGE?object=L-GULONOLACTONE-OXIDASE-RXN L-GULONOLACTONE-OXIDASE-RXN]
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* Category: [[annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8784 RXN-8784]
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** Source: [[annotation-in-silico_annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-64 RXN3DJ-64]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-7742}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=L-ascorbate biosynthesis IV}}
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{{#set: ec number=EC-1.3.1.93}}
{{#set: common name=vitamin C biosynthesis|L-ascorbic acid biosynthesis IV}}
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{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
{{#set: reaction found=2}}
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{{#set: reconstruction category=annotation}}
{{#set: total reaction=6}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: completion rate=33.0}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:40, 21 March 2018

Reaction RXN-12997

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 icosatrienoyl-2-enoyl CoA[c] + 1 NADH[c] + 1 H+[c] => 1 NAD+[c] + 1 (11Z,14Z,17Z)-icosa-11,14,17-trienoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7619, juniperonate biosynthesis: PWY-7619
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links