Difference between revisions of "Tiso gene 11979"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Gene == Gene Tiso_gene_11979 == * right end position: ** 1428 * transcription direction: ** POSITIVE * left end position: ** 16 * centisome position: ** 0.2166553...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
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== Gene Tiso_gene_11979 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1428
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* common name:
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* transcription direction:
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** atp-sulfurylase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.7.4 EC-2.7.7.4]
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** 16
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* centisome position:
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** 0.21665539   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.27.1-RXN]]
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** 1 [[SULFATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 sulfate[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''<=>''' 1 adenosine 5'-phosphosulfate[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10254]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17879]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[DISSULFRED-PWY]], sulfate reduction IV (dissimilatory, to hydrogen sufide)): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6683]], sulfate reduction III (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[P224-PWY]], sulfate reduction V (dissimilatory, to thiosulfate): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1428}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18133 18133]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=16}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
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{{#set: centisome position=0.21665539    }}
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* UNIPROT:
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{{#set: reaction associated=3.1.27.1-RXN}}
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** [http://www.uniprot.org/uniprot/Q12650 Q12650]
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** [http://www.uniprot.org/uniprot/O33581 O33581]
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** [http://www.uniprot.org/uniprot/O34764 O34764]
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** [http://www.uniprot.org/uniprot/Q10600 Q10600]
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** [http://www.uniprot.org/uniprot/O67174 O67174]
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** [http://www.uniprot.org/uniprot/P21156 P21156]
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** [http://www.uniprot.org/uniprot/O23324 O23324]
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** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
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** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
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** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
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** [http://www.uniprot.org/uniprot/P28604 P28604]
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** [http://www.uniprot.org/uniprot/Q27128 Q27128]
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** [http://www.uniprot.org/uniprot/P23845 P23845]
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** [http://www.uniprot.org/uniprot/O43252 O43252]
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** [http://www.uniprot.org/uniprot/Q43170 Q43170]
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** [http://www.uniprot.org/uniprot/Q43183 Q43183]
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** [http://www.uniprot.org/uniprot/Q43870 Q43870]
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** [http://www.uniprot.org/uniprot/Q12555 Q12555]
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** [http://www.uniprot.org/uniprot/P08536 P08536]
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** [http://www.uniprot.org/uniprot/P74241 P74241]
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** [http://www.uniprot.org/uniprot/O48888 O48888]
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** [http://www.uniprot.org/uniprot/Q39595 Q39595]
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** [http://www.uniprot.org/uniprot/Q96349 Q96349]
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** [http://www.uniprot.org/uniprot/Q96541 Q96541]
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** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
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** [http://www.uniprot.org/uniprot/P13441 P13441]
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** [http://www.uniprot.org/uniprot/P13442 P13442]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=atp-sulfurylase}}
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{{#set: ec number=EC-2.7.7.4}}
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{{#set: gene associated=Tiso_gene_10254|Tiso_gene_17879}}
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{{#set: in pathway=DISSULFRED-PWY|PWY-5340|PWY-5278|SULFMETII-PWY|PWY-6683|P224-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:41, 21 March 2018

Gene Tiso_gene_11979

  • right end position:
    • 1428
  • transcription direction:
    • POSITIVE
  • left end position:
    • 16
  • centisome position:
    • 0.21665539
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11979&oldid=43238"