Difference between revisions of "GSAAMINOTRANS-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_8988 == * left end position: ** 505 * transcription direction: ** POSITIVE * right end position: ** 1086 * centisome position: ** 5.1965427...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8988 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
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* left end position:
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* direction:
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** 505
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** glutamate-1-semialdehyde_-aminomutase_chloroplastic
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* right end position:
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* ec number:
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** 1086
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** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
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* centisome position:
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** 5.1965427   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.1.1.274-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
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***ec-number
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* With common name(s):
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* [[ALDEHYDE-REDUCTASE-RXN]]
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** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-12078]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_8141]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14102]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[annotation-experimental_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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* [[RXN-8772]]
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** Source: [[orthology-athaliana]]
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** in-silico_annotation
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** Source: [[orthology-synechocystis]]
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***ec-number
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** Source: [[orthology-esiliculosus]]
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* [[RXN-8773]]
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** Source: [[orthology-creinhardtii]]
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** in-silico_annotation
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== Pathways  ==
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***ec-number
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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== Pathways associated ==
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5515]]
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== Reconstruction information  ==
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* [[PWY-5516]]
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* Category: [[orthology]]
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* [[PWY-6693]]
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** Source: [[orthology-athaliana]]
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* [[PWY-7165]]
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*** Tool: [[pantograph]]
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* [[KETOGLUCONMET-PWY]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=505}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
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{{#set: right end position=1086}}
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* LIGAND-RXN:
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{{#set: centisome position=5.1965427    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
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{{#set: reaction associated=1.1.1.274-RXN|ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
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* UNIPROT:
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{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693|PWY-7165|KETOGLUCONMET-PWY}}
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** [http://www.uniprot.org/uniprot/P18492 P18492]
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** [http://www.uniprot.org/uniprot/P21267 P21267]
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** [http://www.uniprot.org/uniprot/Q06741 Q06741]
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** [http://www.uniprot.org/uniprot/Q06774 Q06774]
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** [http://www.uniprot.org/uniprot/P23893 P23893]
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** [http://www.uniprot.org/uniprot/O26330 O26330]
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** [http://www.uniprot.org/uniprot/P30949 P30949]
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** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
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** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
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** [http://www.uniprot.org/uniprot/O29027 O29027]
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** [http://www.uniprot.org/uniprot/P45621 P45621]
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** [http://www.uniprot.org/uniprot/P24630 P24630]
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** [http://www.uniprot.org/uniprot/P31593 P31593]
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** [http://www.uniprot.org/uniprot/Q39566 Q39566]
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** [http://www.uniprot.org/uniprot/P48247 P48247]
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** [http://www.uniprot.org/uniprot/P46716 P46716]
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** [http://www.uniprot.org/uniprot/Q40147 Q40147]
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** [http://www.uniprot.org/uniprot/O74061 O74061]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-1-semialdehyde_-aminomutase_chloroplastic}}
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{{#set: ec number=EC-5.4.3.8}}
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{{#set: gene associated=Tiso_gene_8141}}
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{{#set: in pathway=PWY-5188}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:42, 21 March 2018

Reaction GSAAMINOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-1-semialdehyde_-aminomutase_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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