Difference between revisions of "RXN-12332"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12332 RXN-12332] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12332 RXN-12332] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
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** mevalonate pathway I
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* Synonym(s):
 
* Synonym(s):
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** isoprenoid pathway
 
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** MVA pathway
 
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** isopentenyl diphosphate biosynthesis
 
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** dimethylallyl diphosphate biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[1.1.1.34-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-6082]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 2 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_17889]]
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 3-aminopropanal[c] '''<=>''' 1 NADH[c] '''+''' 1 &beta;-alanine[c] '''+''' 2 H+[c]
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*** [[Tiso_gene_16182]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* Gene: [[Tiso_gene_7322]]
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** 3 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_16181]]
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== Pathways  ==
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*** [[Tiso_gene_15327]]
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== Reconstruction information  ==
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*** [[Tiso_gene_17451]]
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* Category: [[orthology]]
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** 4 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_4171]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14303]]
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*** [[Tiso_gene_9236]]
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*** [[Tiso_gene_8563]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[IPPISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_8653]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[MEVALONATE-KINASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3811]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN]
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== External links  ==
 
== External links  ==
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* ARACYC:
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* RHEA:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-922 PWY-922]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30698 30698]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00904 R00904]
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{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-1.2.1}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: gene associated=Tiso_gene_7322}}
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{{#set: common name=mevalonate pathway I}}
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{{#set: in pathway=}}
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{{#set: common name=isoprenoid pathway|MVA pathway|isopentenyl diphosphate biosynthesis|dimethylallyl diphosphate biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=6}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: total reaction=7}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=86.0}}
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Latest revision as of 20:43, 21 March 2018

Reaction RXN-12332

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 H2O[c] + 1 3-aminopropanal[c] <=> 1 NADH[c] + 1 β-alanine[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12332&oldid=43436"