Difference between revisions of "RXN-8668"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8668 RXN-8668] == * direction: ** LEFT-TO-RIGHT * common name: ** leukocyte_receptor_cluster_me...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8668 RXN-8668] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** adenosylcobalamin salvage from cobinamide I
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** leukocyte_receptor_cluster_member_9
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** methionine_sulfoxide_reductase_with_associated_domain
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** peptide_methioninesulfoxidereductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.8.4.11 EC-1.8.4.11]
 
* Synonym(s):
 
* Synonym(s):
** vitamin B12 biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
* [[BTUR2-RXN]]
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** 1 [[Protein-L-methionine-S-S-oxides]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[Protein-L-methionine]][c] '''+''' 1 [[WATER]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_6190]]
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** 1 a protein-L-methionine-(S)-S-oxide[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 an oxidized thioredoxin[c] '''+''' 1 a [protein]-L-methionine[c] '''+''' 1 H2O[c]
** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
* [[RXN-8770]]
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Genes have been associated with this reaction based on different elements listed below.
** 1 associated gene(s):
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* Gene: [[Tiso_gene_6116]]
*** [[Tiso_gene_16271]]
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** Source: [[annotation-in-silico_annotation]]
** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_14397]]
== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=COBALAMIN5PSYN-RXN COBALAMIN5PSYN-RXN]
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*** Assignment: EC-NUMBER
* [http://metacyc.org/META/NEW-IMAGE?object=COBINAMIDEKIN-RXN COBINAMIDEKIN-RXN]
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* Gene: [[Tiso_gene_16975]]
* [http://metacyc.org/META/NEW-IMAGE?object=COBINPGUANYLYLTRANS-RXN COBINPGUANYLYLTRANS-RXN]
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** Source: [[annotation-in-silico_annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=DMBPPRIBOSYLTRANS-RXN DMBPPRIBOSYLTRANS-RXN]
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*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* ECOCYC:
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* RHEA:
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14217 14217]
{{#set: taxonomic range=TAX-1224}}
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* LIGAND-RXN:
{{#set: common name=adenosylcobalamin salvage from cobinamide I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04120 R04120]
{{#set: common name=vitamin B12 biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reaction found=2}}
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{{#set: common name=leukocyte_receptor_cluster_member_9}}
{{#set: total reaction=6}}
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{{#set: common name=methionine_sulfoxide_reductase_with_associated_domain}}
{{#set: completion rate=33.0}}
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{{#set: common name=peptide_methioninesulfoxidereductase}}
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{{#set: ec number=EC-1.8.4.11}}
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{{#set: gene associated=Tiso_gene_6116|Tiso_gene_14397|Tiso_gene_16975}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:44, 21 March 2018

Reaction RXN-8668

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • leukocyte_receptor_cluster_member_9
    • methionine_sulfoxide_reductase_with_associated_domain
    • peptide_methioninesulfoxidereductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links