Difference between revisions of "Tiso gene 7582"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-299 RXN0-299] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-ketoglutarate-dependent...")
(Created page with "Category:Gene == Gene Tiso_gene_7582 == * right end position: ** 10826 * transcription direction: ** NEGATIVE * left end position: ** 7023 * centisome position: ** 63.8512...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-299 RXN0-299] ==
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== Gene Tiso_gene_7582 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10826
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* common name:
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* transcription direction:
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** alpha-ketoglutarate-dependent_taurine_dioxygenase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.11.17 EC-1.14.11.17]
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** 7023
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* centisome position:
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** 63.85126   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FORMATETHFLIG-RXN]]
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** 1 [[TAURINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-1772]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SO3]][c] '''+''' 1 [[SUC]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 taurine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 H+[c] '''+''' 1 2-aminoacetaldehyde[c] '''+''' 1 CO2[c] '''+''' 1 sulfite[c] '''+''' 1 succinate[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[FTHFL]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_17672]]
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* [[PWY-2201]]
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** IN-SILICO_ANNOTATION
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* [[PWY-1722]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-3841]]
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== Pathways  ==
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* [[CODH-PWY]]
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* [[PWY0-981]], taurine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-981 PWY0-981]
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* [[PWY-2161]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=10826}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15909 15909]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7023}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05320 R05320]
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{{#set: centisome position=63.85126    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=FORMATETHFLIG-RXN|FTHFL}}
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{{#set: common name=alpha-ketoglutarate-dependent_taurine_dioxygenase}}
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{{#set: pathway associated=PWY-2201|PWY-1722|PWY-3841|CODH-PWY|PWY-2161}}
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{{#set: ec number=EC-1.14.11.17}}
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{{#set: gene associated=Tiso_gene_17672}}
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{{#set: in pathway=PWY0-981}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:44, 21 March 2018

Gene Tiso_gene_7582

  • right end position:
    • 10826
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 7023
  • centisome position:
    • 63.85126
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7582&oldid=43562"