Difference between revisions of "PWY-5525"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11839 RXN-11839] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5525 PWY-5525] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11839 RXN-11839] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5525 PWY-5525] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
 
* common name:
 
* common name:
** trna_pseudouridinesynthase
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** D-glucuronate degradation I
** trna_pseudouridine_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.99.25 EC-5.4.99.25]
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* Synonym(s):
 
* Synonym(s):
 +
** pentose pathway
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** glucuronic acid oxidation pathway
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** glucuronate/xylulose pathway
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** glucuronate degradation
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''5''' reactions in the full pathway
** 1 [[tRNA-uridine55]][c] '''=>''' 1 [[tRNA-pseudouridine55]][c]
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* [[RXN-14693]]
* With common name(s):
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** 0 associated gene:
** 1 a uridine55 in tRNA[c] '''=>''' 1 a pseudouridine55 in tRNA[c]
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** 1 reconstruction source(s) associated:
 
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*** [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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== Reaction(s) not found ==
Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN]
* [[Tiso_gene_19622]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCURONATE-REDUCTASE-RXN GLUCURONATE-REDUCTASE-RXN]
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=L-GULONATE-3-DEHYDROGENASE-RXN L-GULONATE-3-DEHYDROGENASE-RXN]
***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=L-XYLULOSE-REDUCTASE-RXN L-XYLULOSE-REDUCTASE-RXN]
* [[Tiso_gene_18959]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4020]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11913]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9833]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2988]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4021]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-7742}}
{{#set: common name=trna_pseudouridinesynthase}}
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{{#set: common name=D-glucuronate degradation I}}
{{#set: common name=trna_pseudouridine_synthase}}
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{{#set: common name=pentose pathway|glucuronic acid oxidation pathway|glucuronate/xylulose pathway|glucuronate degradation}}
{{#set: ec number=EC-5.4.99.25}}
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{{#set: reaction found=1}}
{{#set: gene associated=Tiso_gene_19622|Tiso_gene_18959|Tiso_gene_4020|Tiso_gene_11913|Tiso_gene_9833|Tiso_gene_2988|Tiso_gene_4021}}
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{{#set: total reaction=5}}
{{#set: in pathway=}}
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{{#set: completion rate=20.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:45, 21 March 2018

Pathway PWY-5525

  • taxonomic range:
  • common name:
    • D-glucuronate degradation I
  • Synonym(s):
    • pentose pathway
    • glucuronic acid oxidation pathway
    • glucuronate/xylulose pathway
    • glucuronate degradation

Reaction(s) found

1 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links