Difference between revisions of "PWY-7401"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCL_gdp_m SUCL_gdp_m] == * direction: ** REVERSIBLE * common name: ** succinyl-CoA ligase (GDP-for...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCL_gdp_m SUCL_gdp_m] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** succinyl-CoA ligase (GDP-forming)
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** crotonate fermentation (to acetate and cyclohexane carboxylate)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''17''' reactions in the full pathway
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** 1.0 [[SUC]][m] '''+''' 1.0 [[CO-A]][m] '''+''' 1.0 [[GTP]][m] '''<=>''' 1.0 [[SUC-COA]][m] '''+''' 1.0 [[GDP]][m] '''+''' 1.0 [[Pi]][m]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1.0 succinate[m] '''+''' 1.0 coenzyme A[m] '''+''' 1.0 GTP[m] '''<=>''' 1.0 succinyl-CoA[m] '''+''' 1.0 GDP[m] '''+''' 1.0 phosphate[m]
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17451]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_15846]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_11866]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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* [[RXN-11662]]
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== Reconstruction information  ==
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** 7 associated gene(s):
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* Category: [[orthology]]
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*** [[Tiso_gene_16703]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_14027]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_5857]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11667]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5857]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN-15013]]
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** 1 associated gene(s):
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*** [[Tiso_gene_7477]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN-8032]]
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** 1 associated gene(s):
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*** [[Tiso_gene_7195]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.259-RXN 1.1.1.259-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.100-RXN 4.2.1.100-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTARYL-COA-DEHYDROG-RXN GLUTARYL-COA-DEHYDROG-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=HADTHAUERA-RXN HADTHAUERA-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5535 PWY-5535]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5535 PWY-5535]
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* [http://metacyc.org/META/NEW-IMAGE?object=R265-RXN R265-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R282-RXN R282-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15008 RXN-15008]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15010 RXN-15010]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15012 RXN-15012]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=succinyl-CoA ligase (GDP-forming)}}
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{{#set: common name=crotonate fermentation (to acetate and cyclohexane carboxylate)}}
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{{#set: gene associated=Tiso_gene_15846|Tiso_gene_11866}}
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{{#set: reaction found=5}}
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{{#set: in pathway=}}
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{{#set: total reaction=17}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=29.0}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:46, 21 March 2018

Pathway PWY-7401

  • taxonomic range:
  • common name:
    • crotonate fermentation (to acetate and cyclohexane carboxylate)
  • Synonym(s):

Reaction(s) found

5 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7401&oldid=43626"