Difference between revisions of "TRANS-RXN0-623"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_syntha...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** chlorophyll cycle
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** polyketide_synthase
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** long_chain_acyl-_synthetase
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** ORF
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** acyl-_synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** chlorophyll b biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''4''' reaction(s) found
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* With identifiers:
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** [[RXN1F-66]]
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** 1 [[CPD66-39]][e] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][e] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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** [[RXN-7677]]
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* With common name(s):
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** [[RXN-7676]]
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** 1 a 2,3,4-saturated fatty acid[e] '''+''' 1 coenzyme A[c] '''+''' 1 H+[e] '''+''' 1 ATP[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
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** [[RXN-7674]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* '''2''' reaction(s) not found
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-7679 RXN-7679]
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* Gene: [[Tiso_gene_7855]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-7678 RXN-7678]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4191]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_348]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5068 PWY-5068]
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{{#set: common name=polyketide_synthase}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: taxonomic range=TAX-33682}}
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=acyl-_synthetase}}
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{{#set: common name=chlorophyll cycle}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=chlorophyll b biosynthesis}}
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{{#set: gene associated=Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_9394|Tiso_gene_348}}
−
{{#set: reaction found=4}}
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{{#set: in pathway=}}
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{{#set: reaction not found=2}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction TRANS-RXN0-623

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • ORF
    • acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 2,3,4-saturated fatty acid[e] + 1 coenzyme A[c] + 1 H+[e] + 1 ATP[c] => 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c] + 1 AMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN0-623&oldid=39506"