Difference between revisions of "4-P-PANTOTHENATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-P-PANTOTHENATE 4-P-PANTOTHENATE] == * smiles: ** CC(C(C(=O)NCCC(=O)[O-])O)(COP([O-])([O-])=O)...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-P-PANTOTHENATE 4-P-PANTOTHENATE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(C(C(=O)NCCC(=O)[O-])O)(COP([O-])([O-])=O)C
 
* common name:
 
* common name:
−
** Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
+
** (R)-4'-phosphopantothenate
−
** propionyl-_carboxylase_alpha_chain
+
* inchi key:
−
* ec number:
+
** InChIKey=XHFVGHPGDLDEQO-ZETCQYMHSA-K
−
** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4]
+
* molecular weight:
 +
** 296.193   
 
* Synonym(s):
 
* Synonym(s):
 +
** 4'-phosphopantothenate
 +
** 4'-P-Pantothenate
 +
** D-4'-phosphopantothenate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[P-PANTOCYSLIG-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c]
+
* [[RXN66-555]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 3-methylcrotonyl-CoA[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 3-methylglutaconyl-CoA[c]
+
* [[PANTOTHENATE-KIN-RXN]]
−
 
+
== Reaction(s) of unknown directionality ==
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_14499]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_5029]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_10675]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* BIGG : 4ppan
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13589 13589]
+
* PUBCHEM:
−
* LIGAND-RXN:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=16755653 16755653]
−
** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
+
* HMDB : HMDB01016
−
* UNIPROT:
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/Q40121 Q40121]
+
** [http://www.genome.jp/dbget-bin/www_bget?C03492 C03492]
−
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
+
* CHEBI:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=10986 10986]
−
{{#set: common name=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial}}
+
* METABOLIGHTS : MTBLC10986
−
{{#set: common name=propionyl-_carboxylase_alpha_chain}}
+
{{#set: smiles=CC(C(C(=O)NCCC(=O)[O-])O)(COP([O-])([O-])=O)C}}
−
{{#set: ec number=EC-6.4.1.4}}
+
{{#set: common name=(R)-4'-phosphopantothenate}}
−
{{#set: gene associated=Tiso_gene_14499|Tiso_gene_5029|Tiso_gene_10675}}
+
{{#set: inchi key=InChIKey=XHFVGHPGDLDEQO-ZETCQYMHSA-K}}
−
{{#set: in pathway=LEU-DEG2-PWY}}
+
{{#set: molecular weight=296.193    }}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: common name=4'-phosphopantothenate|4'-P-Pantothenate|D-4'-phosphopantothenate}}
−
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: consumed by=P-PANTOCYSLIG-RXN|RXN66-555}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: produced by=PANTOTHENATE-KIN-RXN}}

Latest revision as of 19:46, 21 March 2018

Metabolite 4-P-PANTOTHENATE

  • smiles:
    • CC(C(C(=O)NCCC(=O)[O-])O)(COP([O-])([O-])=O)C
  • common name:
    • (R)-4'-phosphopantothenate
  • inchi key:
    • InChIKey=XHFVGHPGDLDEQO-ZETCQYMHSA-K
  • molecular weight:
    • 296.193
  • Synonym(s):
    • 4'-phosphopantothenate
    • 4'-P-Pantothenate
    • D-4'-phosphopantothenate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : 4ppan
  • PUBCHEM:
  • HMDB : HMDB01016
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC10986
"CC(C(C(=O)NCCC(=O)[O-])O)(COP([O-])([O-])=O)C" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=4-P-PANTOTHENATE&oldid=43659"