Difference between revisions of "FORMAMIDASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4961 RXN0-4961] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_polymerase * ec number:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMAMIDASE-RXN FORMAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidase * e...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4961 RXN0-4961] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMAMIDASE-RXN FORMAMIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dna_polymerase
+
** formamidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.11 EC-3.1.11]
+
** [http://enzyme.expasy.org/EC/3.5.1.49 EC-3.5.1.49]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** n [[WATER]][c] '''+''' 1 [[DNA-N]][c] '''=>''' n [[Nucleoside-Monophosphates]][c]
+
** 1 [[FORMAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** n H2O[c] '''+''' 1 DNAn[c] '''=>''' n a nucleoside 5'-monophosphate[c]
+
** 1 formamide[c] '''+''' 1 H2O[c] '''=>''' 1 formate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7025]]
+
* Gene: [[Tiso_gene_13559]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11822]]
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* Gene: [[Tiso_gene_13558]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_17523]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_1474]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7142]], cyanide detoxification II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7142 PWY-7142]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21948 21948]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00524 R00524]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q50228 Q50228]
 +
** [http://www.uniprot.org/uniprot/Q9SZE9 Q9SZE9]
 +
** [http://www.uniprot.org/uniprot/Q9SZF0 Q9SZF0]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dna_polymerase}}
+
{{#set: common name=formamidase}}
−
{{#set: ec number=EC-3.1.11}}
+
{{#set: ec number=EC-3.5.1.49}}
−
{{#set: gene associated=Tiso_gene_7025|Tiso_gene_11822|Tiso_gene_17523|Tiso_gene_1474}}
+
{{#set: gene associated=Tiso_gene_13559|Tiso_gene_13558}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-7142}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:27, 21 March 2018

Reaction FORMAMIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formamidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 formamide[c] + 1 H2O[c] => 1 formate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7142, cyanide detoxification II: PWY-7142
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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