Difference between revisions of "P42-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] == * direction: ** REVERSIBLE * ec number: *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://enzyme.expasy.org/EC/2.4.2.17 EC-2.4.2.17]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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* common name:
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** incomplete reductive TCA cycle
 
* Synonym(s):
 
* Synonym(s):
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** citric acid cycle variant
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** tricarboxylic acid cycle variant
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** TCA cycle variation I
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** incomplete reductive tricarboxylic acid cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
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** 1 [[PPI]][c] '''+''' 1 [[PHOSPHORIBOSYL-ATP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PRPP]][c]
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* [[FUMHYDR-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 diphosphate[c] '''+''' 1 1-(5-phospho-&beta;-D-ribosyl)-ATP[c] '''<=>''' 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
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*** [[Tiso_gene_3691]]
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*** [[Tiso_gene_6720]]
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== Genes associated with this reaction  ==
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** 6 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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*** [[orthology-esiliculosus]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** [[orthology-athaliana]]
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* Category: [[manual]]
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*** [[manual-primary_network]]
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** Source: [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_15144]]
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*** [[Tiso_gene_15145]]
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*** [[Tiso_gene_2812]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_15846]]
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*** [[Tiso_gene_11866]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-224756}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18473 18473]
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{{#set: taxonomic range=TAX-183939}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-183925}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01071 R01071]
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{{#set: common name=incomplete reductive TCA cycle}}
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* UNIPROT:
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{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
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** [http://www.uniprot.org/uniprot/Q9X0D2 Q9X0D2]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/Q58601 Q58601]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/O34520 O34520]
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{{#set: completion rate=57.0}}
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** [http://www.uniprot.org/uniprot/Q9RUE2 Q9RUE2]
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** [http://www.uniprot.org/uniprot/P64347 P64347]
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** [http://www.uniprot.org/uniprot/Q9PM78 Q9PM78]
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** [http://www.uniprot.org/uniprot/Q02129 Q02129]
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** [http://www.uniprot.org/uniprot/P43853 P43853]
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** [http://www.uniprot.org/uniprot/O67543 O67543]
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** [http://www.uniprot.org/uniprot/P40373 P40373]
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** [http://www.uniprot.org/uniprot/P46586 P46586]
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** [http://www.uniprot.org/uniprot/Q55503 Q55503]
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** [http://www.uniprot.org/uniprot/Q9S762 Q9S762]
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** [http://www.uniprot.org/uniprot/P00498 P00498]
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** [http://www.uniprot.org/uniprot/P00499 P00499]
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** [http://www.uniprot.org/uniprot/P60757 P60757]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.4.2.17}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=manual-primary_network}}
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Latest revision as of 19:47, 21 March 2018

Pathway P42-PWY

  • taxonomic range:
  • common name:
    • incomplete reductive TCA cycle
  • Synonym(s):
    • citric acid cycle variant
    • tricarboxylic acid cycle variant
    • TCA cycle variation I
    • incomplete reductive tricarboxylic acid cycle

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P42-PWY&oldid=43772"