Difference between revisions of "TRANS-RXN-218"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-218 TRANS-RXN-218] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula ==...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-218 TRANS-RXN-218] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
+
** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
+
* common name:
+
** incomplete reductive TCA cycle
+
 
* Synonym(s):
 
* Synonym(s):
** citric acid cycle variant
 
** tricarboxylic acid cycle variant
 
** TCA cycle variation I
 
** incomplete reductive tricarboxylic acid cycle
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''4''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
* [[FUMHYDR-RXN]]
+
** 2 [[PROTON]][c] '''=>''' 2 [[PROTON]][e]
** 2 associated gene(s):
+
* With common name(s):
*** [[Tiso_gene_6720]]
+
** 2 H+[c] '''=>''' 2 H+[e]
*** [[Tiso_gene_3691]]
+
 
** 6 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
*** [[annotation-experimental_annotation]]
+
== Pathways  ==
*** [[orthology-esiliculosus]]
+
== Reconstruction information  ==
*** [[annotation-in-silico_annotation]]
+
* Category: [[annotation]]
*** [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
*** [[manual-primary_network]]
+
*** Tool: [[pathwaytools]]
*** [[orthology-creinhardtii]]
+
** Source: [[annotation-experimental_annotation]]
* [[MALATE-DEH-RXN]]
+
*** Tool: [[pathwaytools]]
** 2 associated gene(s):
+
*** [[Tiso_gene_1990]]
+
*** [[Tiso_gene_2323]]
+
** 7 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
+
*** [[orthology-creinhardtii]]
+
* [[PYRUVATE-CARBOXYLASE-RXN]]
+
** 3 associated gene(s):
+
*** [[Tiso_gene_15144]]
+
*** [[Tiso_gene_2812]]
+
*** [[Tiso_gene_15145]]
+
** 4 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[SUCCCOASYN-RXN]]
+
** 2 associated gene(s):
+
*** [[Tiso_gene_15846]]
+
*** [[Tiso_gene_11866]]
+
** 7 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
+
*** [[orthology-creinhardtii]]
+
== Reaction(s) not found ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-224756}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-183939}}
+
{{#set: in pathway=}}
{{#set: taxonomic range=TAX-183925}}
+
{{#set: reconstruction category=annotation}}
{{#set: common name=incomplete reductive TCA cycle}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reaction found=4}}
+
{{#set: total reaction=7}}
+
{{#set: completion rate=57.0}}
+

Latest revision as of 19:47, 21 March 2018

Reaction TRANS-RXN-218

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] => 2 H+[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links