Difference between revisions of "D-RIBULOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * common name: ** oxidoreductase ** ORF * ec...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-RIBULOSE D-RIBULOSE] == * smiles: ** C(O)C(O)C(O)C(=O)CO * common name: ** D-ribulose * inchi...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-RIBULOSE D-RIBULOSE] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C(O)C(O)C(O)C(=O)CO
 
* common name:
 
* common name:
** oxidoreductase
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** D-ribulose
** ORF
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* inchi key:
* ec number:
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** InChIKey=ZAQJHHRNXZUBTE-NQXXGFSBSA-N
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
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* molecular weight:
 +
** 150.131   
 
* Synonym(s):
 
* Synonym(s):
 +
** D-erythro-pentulose
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** D-erythropentulose
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** erythropentulose
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2354]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[tRNA-fragment]][c]
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== Reaction(s) of unknown directionality ==
* With common name(s):
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* [[D-RIBULOKIN-RXN]]
** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 a tRNA fragment[c]
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* [[RIBITOL-2-DEHYDROGENASE-RXN]]
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3898]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14345]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10972]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14344]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10971]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 5556-48-9
{{#set: common name=oxidoreductase}}
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* PUBCHEM:
{{#set: common name=ORF}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=151261 151261]
{{#set: ec number=EC-3.1.26.5}}
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* HMDB : HMDB00621
{{#set: gene associated=Tiso_gene_3898|Tiso_gene_14345|Tiso_gene_10972|Tiso_gene_14344|Tiso_gene_10971}}
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* LIGAND-CPD:
{{#set: in pathway=PWY0-1479}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00309 C00309]
{{#set: reconstruction category=orthology|annotation}}
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* CHEMSPIDER:
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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** [http://www.chemspider.com/Chemical-Structure.133316.html 133316]
{{#set: reconstruction tool=pantograph|pathwaytools}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17173 17173]
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* METABOLIGHTS : MTBLC17173
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{{#set: smiles=C(O)C(O)C(O)C(=O)CO}}
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{{#set: common name=D-ribulose}}
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{{#set: inchi key=InChIKey=ZAQJHHRNXZUBTE-NQXXGFSBSA-N}}
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{{#set: molecular weight=150.131    }}
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{{#set: common name=D-erythro-pentulose|D-erythropentulose|erythropentulose}}
 +
{{#set: reversible reaction associated=D-RIBULOKIN-RXN|RIBITOL-2-DEHYDROGENASE-RXN}}

Latest revision as of 20:48, 21 March 2018

Metabolite D-RIBULOSE

  • smiles:
    • C(O)C(O)C(O)C(=O)CO
  • common name:
    • D-ribulose
  • inchi key:
    • InChIKey=ZAQJHHRNXZUBTE-NQXXGFSBSA-N
  • molecular weight:
    • 150.131
  • Synonym(s):
    • D-erythro-pentulose
    • D-erythropentulose
    • erythropentulose

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 5556-48-9
  • PUBCHEM:
  • HMDB : HMDB00621
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17173