Difference between revisions of "Tiso gene 14226"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9929 RXN-9929] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_14226 == * right end position: ** 9898 * transcription direction: ** NEGATIVE * left end position: ** 7775 * centisome position: ** 71.7581...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9929 RXN-9929] ==
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== Gene Tiso_gene_14226 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9898
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.3.98.1 EC-1.3.98.1]
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** NEGATIVE
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* left end position:
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** 7775
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* centisome position:
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** 71.758194   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[FUM]][c] '''+''' 1 [[DI-H-OROTATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[OROTATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 fumarate[c] '''+''' 1 (S)-dihydroorotate[c] '''=>''' 1 succinate[c] '''+''' 1 orotate[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_5280]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-12196]]
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* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
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** Source: [[annotation-in-silico_annotation]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN0-5462]]
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* Category: [[orthology]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9898}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30062 30062]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7775}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01867 R01867]
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{{#set: centisome position=71.758194    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P74782 P74782]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/Q63707 Q63707]
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** [http://www.uniprot.org/uniprot/Q48240 Q48240]
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** [http://www.uniprot.org/uniprot/P32746 P32746]
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** [http://www.uniprot.org/uniprot/Q02127 Q02127]
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** [http://www.uniprot.org/uniprot/P32748 P32748]
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** [http://www.uniprot.org/uniprot/P28294 P28294]
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** [http://www.uniprot.org/uniprot/P28272 P28272]
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** [http://www.uniprot.org/uniprot/P46539 P46539]
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** [http://www.uniprot.org/uniprot/Q9CFC9 Q9CFC9]
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** [http://www.uniprot.org/uniprot/P25996 P25996]
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** [http://www.uniprot.org/uniprot/Q58070 Q58070]
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** [http://www.uniprot.org/uniprot/P0A7E1 P0A7E1]
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** [http://www.uniprot.org/uniprot/Q9JX66 Q9JX66]
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** [http://www.uniprot.org/uniprot/Q9PPB6 Q9PPB6]
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** [http://www.uniprot.org/uniprot/Q9CFW8 Q9CFW8]
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** [http://www.uniprot.org/uniprot/P45477 P45477]
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** [http://www.uniprot.org/uniprot/P32747 P32747]
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** [http://www.uniprot.org/uniprot/P07670 P07670]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.3.98.1}}
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{{#set: gene associated=Tiso_gene_5280}}
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{{#set: in pathway=PWY-7790}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:48, 21 March 2018

Gene Tiso_gene_14226

  • right end position:
    • 9898
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 7775
  • centisome position:
    • 71.758194
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14226&oldid=43921"