Difference between revisions of "Tiso gene 14140"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Tiso_gene_14140 == * right end position: ** 920 * transcription direction: ** POSITIVE * left end position: ** 283 * centisome position: ** 4.870074...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079] ==
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== Gene Tiso_gene_14140 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 920
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* common name:
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* transcription direction:
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** L-phenylalanine degradation III
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** POSITIVE
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* left end position:
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** 283
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* centisome position:
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** 4.870074   
 
* Synonym(s):
 
* Synonym(s):
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** Ehrlich pathway
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-10606]]
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* [[PHEAMINOTRANS-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 7 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_13892]]
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* Reaction: [[RXN-10607]]
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*** [[Tiso_gene_17809]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_17718]]
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*** Assignment: ec-number
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*** [[Tiso_gene_13538]]
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* Reaction: [[RXN-10608]]
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*** [[Tiso_gene_10680]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_6815]]
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*** Assignment: ec-number
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*** [[Tiso_gene_15680]]
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* Reaction: [[RXN-10609]]
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** 4 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-creinhardtii]]
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* Reaction: [[RXN-10616]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* [[RXN-7700]]
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* Reaction: [[RXN-10617]]
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** 5 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_7649]]
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*** Assignment: ec-number
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*** [[Tiso_gene_6562]]
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* Reaction: [[RXN-10618]]
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*** [[Tiso_gene_5424]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_6563]]
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*** Assignment: ec-number
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*** [[Tiso_gene_5425]]
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* Reaction: [[RXN-10619]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Reaction(s) not found ==
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* Reaction: [[RXN-10784]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.58-RXN 2.6.1.58-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLPYRUVATE-DECARBOXYLASE-RXN PHENYLPYRUVATE-DECARBOXYLASE-RXN]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-11060]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13607]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13608]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14361]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9000]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-162]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-168]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-83]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6261]]
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* [[PWY66-201]]
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* [[PWY-5756]]
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* [[PWY-6398]]
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* [[PWY-6313]]
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* [[PWY66-221]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: right end position=920}}
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{{#set: common name=L-phenylalanine degradation III}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Ehrlich pathway}}
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{{#set: left end position=283}}
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{{#set: reaction found=2}}
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{{#set: centisome position=4.870074    }}
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{{#set: total reaction=4}}
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{{#set: reaction associated=RXN-10606|RXN-10607|RXN-10608|RXN-10609|RXN-10616|RXN-10617|RXN-10618|RXN-10619|RXN-10784|RXN-11060|RXN-13607|RXN-13608|RXN-14361|RXN-9000|RXN66-162|RXN66-168|RXN66-83|UDP-GLUCURONOSYLTRANSFERASE-RXN}}
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{{#set: completion rate=50.0}}
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{{#set: pathway associated=PWY-6261|PWY66-201|PWY-5756|PWY-6398|PWY-6313|PWY66-221}}

Latest revision as of 19:49, 21 March 2018

Gene Tiso_gene_14140

  • right end position:
    • 920
  • transcription direction:
    • POSITIVE
  • left end position:
    • 283
  • centisome position:
    • 4.870074
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14140&oldid=43936"