Difference between revisions of "PWY-7409"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNREDUC-RXN RIBOFLAVINSYNREDUC-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** r...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNREDUC-RXN RIBOFLAVINSYNREDUC-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** riboflavin_biosynthesis_protein
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** phospholipid remodeling (phosphatidylethanolamine, yeast)
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.193 EC-1.1.1.193]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-602]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-1086]][c]
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* [[RXN-14160]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H+[c] '''+''' 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c]
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*** [[Tiso_gene_17232]]
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*** [[Tiso_gene_5334]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_8035]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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* [[RXN-15035]]
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***EC-NUMBER
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** 9 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_2505]]
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* [[Tiso_gene_1389]]
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*** [[Tiso_gene_12478]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_8353]]
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***EC-NUMBER
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*** [[Tiso_gene_12479]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_19778]]
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** [[pantograph]]-[[synechocystis]]
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*** [[Tiso_gene_15692]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_20565]]
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== Pathways  ==
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*** [[Tiso_gene_334]]
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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*** [[Tiso_gene_12375]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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** 3 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* [[RXN-15036]]
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** Source: [[orthology-synechocystis]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_10604]]
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** Source: [[orthology-esiliculosus]]
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** 3 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-experimental_annotation]]
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* Category: [[annotation]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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* [[RXN-15067]]
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** 4 associated gene(s):
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*** [[Tiso_gene_15046]]
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*** [[Tiso_gene_12960]]
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*** [[Tiso_gene_15047]]
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*** [[Tiso_gene_12959]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17845 17845]
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{{#set: common name=phospholipid remodeling (phosphatidylethanolamine, yeast)}}
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* LIGAND-RXN:
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{{#set: reaction found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03458 R03458]
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{{#set: total reaction=4}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=100.0}}
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{{#set: common name=riboflavin_biosynthesis_protein}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.1.1.193}}
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{{#set: gene associated=Tiso_gene_8035|Tiso_gene_1389}}
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{{#set: in pathway=RIBOSYN2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:49, 21 March 2018

Pathway PWY-7409

  • taxonomic range:
  • common name:
    • phospholipid remodeling (phosphatidylethanolamine, yeast)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7409&oldid=43941"