Difference between revisions of "CPD-7526"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7526 CPD-7526] == * smiles: ** CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7526 CPD-7526] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)C)C)C)C
 
* common name:
 
* common name:
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** polyketide_synthase
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** 9,9'-di-cis-ζ-carotene
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** InChIKey=BIWLELKAFXRPDE-ZURBLSRNSA-N
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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* molecular weight:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 540.914   
 
* Synonym(s):
 
* Synonym(s):
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** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
 
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** β-hydroxypalmitoyl-acyl carrier protein dehydrase
 
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** β-hydroxypalmitoyl thioester dehydratase
 
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** β-hydroxypalmityl-ACP dehydrase
 
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** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
 
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** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
 
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-11356]]
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** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-11354]]
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** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 a trans hexadecenoyl-[acp][c] '''+''' 1 H2O[c]
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== Reaction(s) of unknown directionality ==
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* [[RXN-12242]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6440490 6440490]
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* UNIPROT:
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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** [http://www.chemspider.com/Chemical-Structure.4944750.html 4944750]
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** [http://www.uniprot.org/uniprot/P07149 P07149]
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* HMDB : HMDB03063
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=48716 48716]
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=polyketide_synthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C15857 C15857]
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: smiles=CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)C)C)C)C}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: common name=9,9'-di-cis-ζ-carotene}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: inchi key=InChIKey=BIWLELKAFXRPDE-ZURBLSRNSA-N}}
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{{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|β-hydroxypalmitoyl thioester dehydratase|β-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
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{{#set: molecular weight=540.914    }}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_6884|Tiso_gene_135}}
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{{#set: consumed by=RXN-11356}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: produced by=RXN-11354}}
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{{#set: reconstruction category=manual|annotation}}
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{{#set: reversible reaction associated=RXN-12242}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:49, 21 March 2018

Metabolite CPD-7526

  • smiles:
    • CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)C)C)C)C
  • common name:
    • 9,9'-di-cis-ζ-carotene
  • inchi key:
    • InChIKey=BIWLELKAFXRPDE-ZURBLSRNSA-N
  • molecular weight:
    • 540.914
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-7526&oldid=43993"