Difference between revisions of "3.4.25.1-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.25.1-RXN 3.4.25.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 26S protease regulato...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.25.1-RXN 3.4.25.1-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
 
* common name:
 
* common name:
−
** L-homocysteine and L-cysteine interconversion
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** 26S protease regulatory subunit 7
 +
** 26S protease regulatory subunit 8 homolog B
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.4.25.1 EC-3.4.25.1]
 
* Synonym(s):
 
* Synonym(s):
−
** transsulfuration pathway
 
  
−
== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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** 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_7852]]
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** 1 a protein[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c]
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*** [[Tiso_gene_3732]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_16496]]
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*** [[orthology-esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN-14048]]
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* Gene: [[Tiso_gene_3310]]
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** 1 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_3732]]
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* Gene: [[Tiso_gene_11901]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2549]]
−
* [[RXN-15131]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_18135]]
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*** [[Tiso_gene_3732]]
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** Source: [[annotation-experimental_annotation]]
−
** 1 reconstruction source(s) associated:
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*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_1855]]
−
== Reaction(s) not found ==
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** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_7332]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_20415]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5953]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19087]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11443]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
−
{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/Q7DLR9 Q7DLR9]
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{{#set: common name=L-homocysteine and L-cysteine interconversion}}
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** [http://www.uniprot.org/uniprot/P28062 P28062]
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{{#set: common name=transsulfuration pathway}}
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** [http://www.uniprot.org/uniprot/Q9TRJ7 Q9TRJ7]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P30656 P30656]
−
{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P30657 P30657]
−
{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P28074 P28074]
 +
** [http://www.uniprot.org/uniprot/P40302 P40302]
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** [http://www.uniprot.org/uniprot/O24633 O24633]
 +
** [http://www.uniprot.org/uniprot/P40303 P40303]
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** [http://www.uniprot.org/uniprot/Q9V122 Q9V122]
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** [http://www.uniprot.org/uniprot/P40306 P40306]
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** [http://www.uniprot.org/uniprot/P28063 P28063]
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** [http://www.uniprot.org/uniprot/P25786 P25786]
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** [http://www.uniprot.org/uniprot/P28076 P28076]
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** [http://www.uniprot.org/uniprot/O13268 O13268]
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** [http://www.uniprot.org/uniprot/P34064 P34064]
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** [http://www.uniprot.org/uniprot/P60901 P60901]
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** [http://www.uniprot.org/uniprot/P18421 P18421]
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** [http://www.uniprot.org/uniprot/P18053 P18053]
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** [http://www.uniprot.org/uniprot/P28072 P28072]
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** [http://www.uniprot.org/uniprot/P22769 P22769]
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** [http://www.uniprot.org/uniprot/P25043 P25043]
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** [http://www.uniprot.org/uniprot/P28065 P28065]
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** [http://www.uniprot.org/uniprot/P30186 P30186]
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** [http://www.uniprot.org/uniprot/P60900 P60900]
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** [http://www.uniprot.org/uniprot/P34065 P34065]
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** [http://www.uniprot.org/uniprot/P34067 P34067]
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** [http://www.uniprot.org/uniprot/P40301 P40301]
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** [http://www.uniprot.org/uniprot/Q8AVD2 Q8AVD2]
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** [http://www.uniprot.org/uniprot/Q7LZF1 Q7LZF1]
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** [http://www.uniprot.org/uniprot/P40307 P40307]
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** [http://www.uniprot.org/uniprot/P23724 P23724]
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** [http://www.uniprot.org/uniprot/P28070 P28070]
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** [http://www.uniprot.org/uniprot/P22141 P22141]
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** [http://www.uniprot.org/uniprot/P49721 P49721]
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** [http://www.uniprot.org/uniprot/P49720 P49720]
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** [http://www.uniprot.org/uniprot/P25156 P25156]
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** [http://www.uniprot.org/uniprot/Q09682 Q09682]
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** [http://www.uniprot.org/uniprot/Q09720 Q09720]
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** [http://www.uniprot.org/uniprot/P48004 P48004]
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** [http://www.uniprot.org/uniprot/P38624 P38624]
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** [http://www.uniprot.org/uniprot/P32379 P32379]
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** [http://www.uniprot.org/uniprot/Q7LZF0 Q7LZF0]
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** [http://www.uniprot.org/uniprot/P62333 P62333]
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** [http://www.uniprot.org/uniprot/Q24178 Q24178]
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** [http://www.uniprot.org/uniprot/Q27575 Q27575]
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** [http://www.uniprot.org/uniprot/P21242 P21242]
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** [http://www.uniprot.org/uniprot/P21243 P21243]
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** [http://www.uniprot.org/uniprot/P23638 P23638]
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** [http://www.uniprot.org/uniprot/P23639 P23639]
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** [http://www.uniprot.org/uniprot/P12881 P12881]
 +
** [http://www.uniprot.org/uniprot/P25787 P25787]
 +
** [http://www.uniprot.org/uniprot/P20618 P20618]
 +
** [http://www.uniprot.org/uniprot/P25788 P25788]
 +
** [http://www.uniprot.org/uniprot/P25789 P25789]
 +
** [http://www.uniprot.org/uniprot/P18420 P18420]
 +
** [http://www.uniprot.org/uniprot/P18422 P18422]
 +
** [http://www.uniprot.org/uniprot/P21670 P21670]
 +
** [http://www.uniprot.org/uniprot/P52428 P52428]
 +
** [http://www.uniprot.org/uniprot/P93395 P93395]
 +
** [http://www.uniprot.org/uniprot/O04861 O04861]
 +
** [http://www.uniprot.org/uniprot/Q8LD27 Q8LD27]
 +
** [http://www.uniprot.org/uniprot/O48551 O48551]
 +
** [http://www.uniprot.org/uniprot/O24030 O24030]
 +
** [http://www.uniprot.org/uniprot/P42742 P42742]
 +
** [http://www.uniprot.org/uniprot/O81147 O81147]
 +
** [http://www.uniprot.org/uniprot/O23708 O23708]
 +
** [http://www.uniprot.org/uniprot/O24616 O24616]
 +
** [http://www.uniprot.org/uniprot/O81149 O81149]
 +
** [http://www.uniprot.org/uniprot/Q42134 Q42134]
 +
** [http://www.uniprot.org/uniprot/P34066 P34066]
 +
** [http://www.uniprot.org/uniprot/O23712 O23712]
 +
** [http://www.uniprot.org/uniprot/O23710 O23710]
 +
** [http://www.uniprot.org/uniprot/Q7DLS1 Q7DLS1]
 +
** [http://www.uniprot.org/uniprot/O81153 O81153]
 +
** [http://www.uniprot.org/uniprot/O23714 O23714]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=26S protease regulatory subunit 7}}
 +
{{#set: common name=26S protease regulatory subunit 8 homolog B}}
 +
{{#set: ec number=EC-3.4.25.1}}
 +
{{#set: gene associated=Tiso_gene_16496|Tiso_gene_3310|Tiso_gene_11901|Tiso_gene_2549|Tiso_gene_18135|Tiso_gene_1855|Tiso_gene_7332|Tiso_gene_20415|Tiso_gene_5953|Tiso_gene_19087|Tiso_gene_11443}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction 3.4.25.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 26S protease regulatory subunit 7
    • 26S protease regulatory subunit 8 homolog B
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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