Difference between revisions of "RXN-12184"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** structure-specific_en...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** structure-specific_endonuclease_subunit_slx1_homolog
+
** polyketide_synthase
 +
** ORF
 +
** long_chain_acyl-_synthetase
 +
** acyl-_synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.22.4 EC-3.1.22.4]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-Combined-With-Exogenous-DNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Resolution-of-Recombinational-Junction]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD-17637]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17638]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 DNA combined with exogenous DNA to form a recombinational junction[c] '''+''' 1 H2O[c] '''=>''' 1 resolution of recombinational junction formation of two intact strands[c]
+
** 1 coenzyme A[c] '''+''' 1 7-hydroxylaurate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 7-hydroxylauroyl-CoA[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11797]]
+
* Gene: [[Tiso_gene_9394]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4191]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_348]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A814 P0A814]
 
−
** [http://www.uniprot.org/uniprot/P44633 P44633]
 
−
** [http://www.uniprot.org/uniprot/O83530 O83530]
 
−
** [http://www.uniprot.org/uniprot/O84510 O84510]
 
−
** [http://www.uniprot.org/uniprot/O25544 O25544]
 
−
** [http://www.uniprot.org/uniprot/Q9PLU8 Q9PLU8]
 
−
** [http://www.uniprot.org/uniprot/Q51424 Q51424]
 
−
** [http://www.uniprot.org/uniprot/Q37873 Q37873]
 
−
** [http://www.uniprot.org/uniprot/P0AG74 P0AG74]
 
−
** [http://www.uniprot.org/uniprot/Q55506 Q55506]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=structure-specific_endonuclease_subunit_slx1_homolog}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: ec number=EC-3.1.22.4}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_11797}}
+
{{#set: common name=long_chain_acyl-_synthetase}}
−
{{#set: in pathway=}}
+
{{#set: common name=acyl-_synthetase}}
 +
{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_9394|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_7855|Tiso_gene_348}}
 +
{{#set: in pathway=PWY-6733}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction RXN-12184

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 7-hydroxylaurate[c] + 1 ATP[c] => 1 diphosphate[c] + 1 7-hydroxylauroyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12184&oldid=44171"