Difference between revisions of "Tiso gene 13074"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Gene == Gene Tiso_gene_13074 == * right end position: ** 4501 * transcription direction: ** POSITIVE * left end position: ** 2848 * centisome position: ** 43.4610...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN] ==
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== Gene Tiso_gene_13074 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4501
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.84 EC-2.5.1.84]
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** POSITIVE
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* left end position:
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** 2848
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* centisome position:
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** 43.46101   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.4.21.4-RXN]]
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** 7 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYL-PP]][c] '''=>''' 7 [[PPI]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 7 isopentenyl diphosphate[c] '''+''' 1 geranyl diphosphate[c] '''=>''' 7 diphosphate[c] '''+''' 1 all-trans-nonaprenyl diphosphate[c]
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* Reaction: [[RXN-17832]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_18201]]
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* [[PWY-7797]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_2848]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5805]], nonaprenyl diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5805 PWY-5805]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4501}}
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** [http://www.genome.jp/dbget-bin/www_bget?R09250 R09250]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07267 R07267]
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{{#set: left end position=2848}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=43.46101    }}
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{{#set: ec number=EC-2.5.1.84}}
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{{#set: reaction associated=3.4.21.4-RXN|RXN-17832}}
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{{#set: gene associated=Tiso_gene_18201|Tiso_gene_2848}}
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{{#set: pathway associated=PWY-7797}}
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{{#set: in pathway=PWY-5805}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:51, 21 March 2018

Gene Tiso_gene_13074

  • right end position:
    • 4501
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2848
  • centisome position:
    • 43.46101
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13074&oldid=44220"